RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	ECM29	Q5VYK3	1845 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	LAMB1	P07942	1786 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ARAP2	Q8WZ64	1704 aa		3.56	□□□□□ -1.84
ATM-223	ENST00000533979	ASH1L	Q9NR48	2969 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	GCN1	Q92616	2671 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	KIR2DL5B	A0A0G2JN68	375 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	KIR2DL5B	A0A0G2JPC4	375 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	RBMY1B	A6NDE4	496 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	RBMY1E	A6NEQ0	496 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	TVP23A	A6NH52	213 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	HACD1	B0YJ81	288 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979		F6UB75	175 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	SAP18	O00422	153 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	RAD51C	O43502	376 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	NDUFA2	O43678	99 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ICOSLG	O75144	302 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ARG1	P05089	322 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	GP1BA	P07359	652 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	CD3G	P09693	182 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	RBMY1D	P0C7P1	496 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	RBMY1A1	P0DJD3	496 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	GFAP	P14136	432 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	FOLR1	P15328	257 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	CXCR2	P25025	360 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	G0S2	P27469	103 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	KDELR2	P33947	212 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ARR3	P36575	388 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	MAGEA6	P43360	314 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	GPR6	P46095	362 aa	Predicted RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	DNASE1L1	P49184	302 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	UBE2K	P61086	200 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	REEP5	Q00765	189 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ACVR1	Q04771	509 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	BCL2L1	Q07817	233 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	PDIA2	Q13087	525 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	UNC119	Q13432	240 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	LY6D	Q14210	128 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	TAL2	Q16559	108 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ZNF239	Q16600	458 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	KCTD19	Q17RG1	926 aa	Predicted RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	DUPD1	Q68J44	220 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ABHD13	Q7L211	337 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	TMEM150A	Q86TG1	271 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	SLC13A5	Q86YT5	568 aa	Predicted RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	CBLN2	Q8IUK8	224 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	BOD1L2	Q8IYS8	172 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	KIR2DL5A	Q8N109	375 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	C4orf32	Q8N8J7	132 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979		Q8NBF4	154 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	CCDC112	Q8NEF3	446 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	OR6Q1	Q8NGQ2	317 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	OR10R2	Q8NGX6	335 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	OR6K2	Q8NGY2	324 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	KIR2DL5B	Q8NHK3	375 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ESR2	Q92731	530 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	EEF1AKMT3	Q96AZ1	226 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	MED8	Q96G25	268 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ZNF597	Q96LX8	424 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ZFP3	Q96NJ6	502 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	DHRS9	Q9BPW9	319 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	ZNF251	Q9BRH9	671 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	AGMAT	Q9BSE5	352 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	TIMM29	Q9BSF4	260 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	SLC22A4	Q9H015	551 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	UPF3A	Q9H1J1	476 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	C20orf85	Q9H1P6	137 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	OR51B5	Q9H339	312 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	TUBB1	Q9H4B7	451 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	JPT2	Q9H910	190 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	SLC38A10	Q9HBR0	1119 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	DIABLO	Q9NR28	239 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	IMP3	Q9NV31	184 aa	Known RBP	3.55	□□□□□ -1.84
ATM-223	ENST00000533979	CYB5R1	Q9UHQ9	305 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	NAGK	Q9UJ70	344 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	MOB4	Q9Y3A3	225 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	NCOR2	Q9Y618	2525 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	LRRC37A2	A6NM11	1700 aa		3.55	□□□□□ -1.84
ATM-223	ENST00000533979	IGHV1OR15-1	A0A075B7D0	117 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	EFCAB10	A6NFE3	127 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979		A6NIZ1	184 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979		A8MX80	341 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	C2orf74	A8MZ97	194 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	MIF4GD	A9UHW6	222 aa	Known RBP	3.54	□□□□□ -1.84
ATM-223	ENST00000533979		E9PAM4	449 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	PRAMEF26	H0Y7S4	382 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	KLRC4-KLRK1	H3BQV0	150 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	ALOX12B	O75342	701 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	SRSF10	O75494	262 aa	Known RBP	3.54	□□□□□ -1.84
ATM-223	ENST00000533979	TRAPPC6A	O75865	159 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	CRYZL1	O95825	349 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	ACTL6A	O96019	429 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	TIMP1	P01033	207 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	IFNA6	P05013	189 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	GNAO1	P09471	354 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	RD3L	P0DJH9	198 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	PRPS1L1	P21108	318 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	CMA1	P23946	247 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	IL2RG	P31785	369 aa		3.54	□□□□□ -1.84
ATM-223	ENST00000533979	GPX4	P36969	197 aa	Predicted RBP	3.54	□□□□□ -1.84
ATM-223	ENST00000533979	CD79B	P40259	229 aa		3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms