RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ITFG2Q969R8 447 aa25.2■■□□□ 1.62
SSSCA1-207ENST00000533115 APOL4Q9BPW4 351 aa25.2■■□□□ 1.62
SSSCA1-207ENST00000533115 WARS2Q9UGM6 360 aaKnown RBP25.2■■□□□ 1.62
SSSCA1-207ENST00000533115 NUFIP1Q9UHK0 495 aaKnown RBP25.2■■□□□ 1.62
SSSCA1-207ENST00000533115 ANK2Q01484 3957 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 IGHV3OR15-7A0A075B7D8 119 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 ZNF816-ZNF321PA0A0X1KG74 233 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 TMEM210A6NLX4 147 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 ZNF670-ZNF695F2Z2N8 137 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 H3BNX3 289 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 CFHR2P36980 270 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 ZFP1Q6P2D0 407 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 KRT74Q7RTS7 529 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 COMMD2Q86X83 199 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 ZDHHC23Q8IYP9 409 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 OR51G2Q8NGK0 314 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 OR51E1Q8TCB6 317 aa25.19■■□□□ 1.62
SSSCA1-207ENST00000533115 C22orf46C9J442 243 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 IGLV3-1P01715 115 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 ATP6V1B1P15313 513 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 MUC1P15941 1255 aaPredicted RBP25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 MFGE8Q08431 387 aaPredicted RBP25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 POU4F2Q12837 409 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 CD276Q5ZPR3 534 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 OR8J1Q8NGP2 316 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 HPSE2Q8WWQ2 592 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 PPP1R14AQ96A00 147 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 UPRTQ96BW1 309 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 RNF170Q96K19 258 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 HIST1H2AAQ96QV6 131 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 FGF23Q9GZV9 251 aaPredicted RBP25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 GPR84Q9NQS5 396 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 ZNF69Q9UC07 566 aa25.18■■□□□ 1.62
SSSCA1-207ENST00000533115 MAGEB4O15481 346 aaPredicted RBP25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 ENSAO43768 121 aaKnown RBP25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 SRSF10O75494 262 aaKnown RBP25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 HTR1FP30939 366 aa25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 EGR3Q06889 387 aa25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 MICBQ29980 383 aa25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 FAM76BQ5HYJ3 339 aa25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 KCTD8Q6ZWB6 473 aa25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 RPL3LQ92901 407 aaKnown RBP25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 FAM71F1Q96KD3 344 aaPredicted RBP25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 KAAG1Q9UBP8 84 aa25.17■■□□□ 1.62
SSSCA1-207ENST00000533115 SRRM5B3KS81 715 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 TRIM77I1YAP6 450 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 ALPLP05186 524 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 TUSC1Q2TAM9 212 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 OR10Z1Q8NGY1 313 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 RASSF4Q9H2L5 321 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 MOB1AQ9H8S9 216 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 SMURF1Q9HCE7 757 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 MRM2Q9UI43 246 aaKnown RBP25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 GTF2A1LQ9UNN4 478 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 R4GMQ9 66 aa25.16■■□□□ 1.62
SSSCA1-207ENST00000533115 LOC110117498-PIK3R3F6TDL0 507 aa25.15■■□□□ 1.62
SSSCA1-207ENST00000533115 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP25.15■■□□□ 1.62
SSSCA1-207ENST00000533115 CDC42P60953 191 aa25.15■■□□□ 1.62
SSSCA1-207ENST00000533115 RIPPLY1Q0D2K3 151 aa25.15■■□□□ 1.62
SSSCA1-207ENST00000533115 THAP5Q7Z6K1 395 aa25.15■■□□□ 1.62
SSSCA1-207ENST00000533115 SCCPDHQ8NBX0 429 aa25.15■■□□□ 1.62
SSSCA1-207ENST00000533115 ORC6Q9Y5N6 252 aa25.15■■□□□ 1.62
SSSCA1-207ENST00000533115 EBAG9O00559 213 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 TMPRSS2O15393 492 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 TTRP02766 147 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 IGHV4-38-2P0DP08 117 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 CEACAM21Q3KPI0 293 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 ZBTB37Q5TC79 503 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 PLEKHG7Q6ZR37 379 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 C10orf67Q8IYJ2 551 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 BCL6BQ8N143 479 aaPredicted RBP25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 SIGLECL1Q8N7X8 197 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 FAM216AQ8WUB2 273 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 EME1Q96AY2 570 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 C12orf43Q96C57 262 aaKnown RBP25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 TBX5Q99593 518 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 ESM1Q9NQ30 184 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 USE1Q9NZ43 259 aa25.14■■□□□ 1.62
SSSCA1-207ENST00000533115 DVL1O14640 695 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 EI24O14681 340 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 FCN3O75636 299 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 OR2T7P0C7T2 308 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 GPM6AP51674 278 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 FGF12P61328 243 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 TMED1Q13445 227 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 WDR38Q5JTN6 314 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 CEP78Q5JTW2 689 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 BCL2L15Q5TBC7 163 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 RBMS3Q6XE24 437 aaKnown RBP25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 SSX6Q7RTT6 188 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 ELMOD2Q8IZ81 293 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 ZDHHC22Q8N966 263 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 OR2T27Q8NH04 317 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 SEH1LQ96EE3 360 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 CCL13Q99616 98 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 MS4A7Q9GZW8 240 aaPredicted RBP25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 OR52A1Q9UKL2 312 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 PIGLQ9Y2B2 252 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 SNX5Q9Y5X3 404 aa25.13■■□□□ 1.61
SSSCA1-207ENST00000533115 IGHV3OR16-10A0A075B7F0 116 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 314.2 ms