RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 PLPP7Q8NBV4 271 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 OR11L1Q8NGX0 322 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 OR52N1Q8NH53 320 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 ZNF420Q8TAQ5 688 aaPredicted RBP13.99□□□□□ -0.17
PKP3-209ENST00000533069 RGCCQ9H4X1 137 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 PAK1IP1Q9NWT1 392 aaPredicted RBP13.99□□□□□ -0.17
PKP3-209ENST00000533069 METRNQ9UJH8 293 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 LAMP5Q9UJQ1 280 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 CAB39Q9Y376 341 aaPredicted RBP13.99□□□□□ -0.17
PKP3-209ENST00000533069 N6AMT1Q9Y5N5 214 aa13.99□□□□□ -0.17
PKP3-209ENST00000533069 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.98□□□□□ -0.17
PKP3-209ENST00000533069 C5orf63A6NC05 138 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 A8MXK9 166 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 TCF21O43680 179 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 SELENOFO60613 162 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 PTBP3O95758 552 aaKnown RBP13.98□□□□□ -0.17
PKP3-209ENST00000533069 CYB5R3P00387 301 aaPredicted RBP13.98□□□□□ -0.17
PKP3-209ENST00000533069 ANOS1P23352 680 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 LCN2P80188 198 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 LIPNQ5VXI9 398 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 DEGS2Q6QHC5 323 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 PLEKHG7Q6ZR37 379 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 PRSS45Q7RTY3 260 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.98□□□□□ -0.17
PKP3-209ENST00000533069 SPARTQ8N0X7 666 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 SYS1Q8N2H4 156 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 OR10H4Q8NGA5 316 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 OR56B2PQ8NGI1 322 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 THEM6Q8WUY1 208 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 AMELYQ99218 206 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 TMPRSS13Q9BYE2 586 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 OR10A2Q9H208 303 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 METTL17Q9H7H0 456 aaPredicted RBP13.98□□□□□ -0.17
PKP3-209ENST00000533069 NIPAL2Q9H841 368 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 ERVK-18Q9QC07 812 aa13.98□□□□□ -0.17
PKP3-209ENST00000533069 POLR3KQ9Y2Y1 108 aaPredicted RBP13.98□□□□□ -0.17
PKP3-209ENST00000533069 IGHV3-64DA0A0J9YX35 117 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 ANKRD30BLA7E2S9 258 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 CEACAM18A8MTB9 384 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 SULT1C4O75897 302 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 MT-ND2P03891 347 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 ALOX5APP20292 161 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 C21orf33P30042 268 aaPredicted RBP13.97□□□□□ -0.17
PKP3-209ENST00000533069 NAA10P41227 235 aaPredicted RBP13.97□□□□□ -0.17
PKP3-209ENST00000533069 ZNF121P58317 390 aaPredicted RBP13.97□□□□□ -0.17
PKP3-209ENST00000533069 IRF3Q14653 427 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 ESCO2Q56NI9 601 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 FAM57BQ71RH2 274 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 ZNF367Q7RTV3 350 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 C1QL2Q7Z5L3 287 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 REEP6Q96HR9 211 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 FN3KRPQ9HA64 309 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 TMEM165Q9HC07 324 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 ISYNA1Q9NPH2 558 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 ERVK13-1Q9NX77 482 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 MIOXQ9UGB7 285 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 PPIAL4AQ9Y536 164 aa13.97□□□□□ -0.17
PKP3-209ENST00000533069 hCG_38984A0A1B0GV85 526 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 ZNF254O75437 659 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 HTR1AP08908 422 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 MRPL3P09001 348 aaKnown RBP13.96□□□□□ -0.17
PKP3-209ENST00000533069 RPS2P15880 293 aaKnown RBP13.96□□□□□ -0.17
PKP3-209ENST00000533069 JUNBP17275 347 aaPredicted RBP13.96□□□□□ -0.17
PKP3-209ENST00000533069 ZFP36P26651 326 aaKnown RBP13.96□□□□□ -0.17
PKP3-209ENST00000533069 RBMXP38159 391 aaKnown RBP13.96□□□□□ -0.17
PKP3-209ENST00000533069 PMELP40967 661 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 WNT4P56705 351 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 TAS2R43P59537 309 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 PSMA6P60900 246 aaKnown RBP13.96□□□□□ -0.17
PKP3-209ENST00000533069 FAM3AP98173 230 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 BDH1Q02338 343 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 ROM1Q03395 351 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 ZNF404Q494X3 552 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 PRAMEF6Q5VXH4 476 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 FAM220AQ7Z4H9 259 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 FTMTQ8N4E7 242 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 NANOGP1Q8N7R0 232 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 RORBQ92753 470 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 SGK3Q96BR1 496 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 PGAM5Q96HS1 289 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 ALG8Q9BVK2 526 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 C7orf69Q9H7B7 122 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 ACOT13Q9NPJ3 140 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 C14orf119Q9NWQ9 140 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 OR5V1Q9UGF6 321 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 ZNF391Q9UJN7 358 aa13.96□□□□□ -0.17
PKP3-209ENST00000533069 LOC105371242A0A075B767 164 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 A0A0A6YYJ9 748 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 A0A1W2PQL4 384 aaPredicted RBP13.95□□□□□ -0.18
PKP3-209ENST00000533069 AVPP01185 164 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 KRT8P05787 483 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 WNT2P09544 360 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 LIMS3P0CW19 117 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 LIMS4P0CW20 117 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 DCTDP32321 178 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 RPL5P46777 297 aaKnown RBP13.95□□□□□ -0.18
PKP3-209ENST00000533069 EMX1Q04741 257 aaPredicted RBP13.95□□□□□ -0.18
PKP3-209ENST00000533069 ACSM1Q08AH1 577 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 CDONQ4KMG0 1287 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 UBE2UQ5VVX9 321 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms