RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 TREM2Q9NZC2 230 aa18.86■□□□□ 0.61
LRRK1-208ENST00000532029 IGHV4-30-2A0A087WSY4 118 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 RP2O75695 350 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 NRASP01111 189 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 ZNF20P17024 532 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 SPHARQ15513 63 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 PRAMEF6Q5VXH4 476 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 PLCXD3Q63HM9 321 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 SPNS3Q6ZMD2 512 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 MOGAT3Q86VF5 341 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 TGIF2LYQ8IUE0 185 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 OR10AC1Q8NH08 325 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 RPS4Y2Q8TD47 263 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 TSEN15Q8WW01 171 aaKnown RBP18.85■□□□□ 0.61
LRRK1-208ENST00000532029 OR5P3Q8WZ94 311 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 ERGIC1Q969X5 290 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 C10orf35Q96D05 121 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 ITPKCQ96DU7 683 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 GCM1Q9NP62 436 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 CACNG2Q9Y698 323 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 SIRT4Q9Y6E7 314 aaPredicted RBP18.85■□□□□ 0.61
LRRK1-208ENST00000532029 CREBBPQ92793 2442 aa18.85■□□□□ 0.61
LRRK1-208ENST00000532029 MYO9AB2RTY4 2548 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 PRRC2AP48634 2157 aaKnown RBP18.84■□□□□ 0.61
LRRK1-208ENST00000532029 A6NIN4 97 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 CLDN25C9JDP6 229 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 IFNL4K9M1U5 179 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 LMX1BO60663 402 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 MRPS14O60783 128 aaKnown RBP18.84■□□□□ 0.61
LRRK1-208ENST00000532029 SERPINA3P01011 423 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 GRPP07492 148 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 SLC25A16P16260 332 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 GIFP27352 417 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 GATA4P43694 442 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 GPR6P46095 362 aaPredicted RBP18.84■□□□□ 0.61
LRRK1-208ENST00000532029 TMEM33P57088 247 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 BDH1Q02338 343 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 CEP78Q5JTW2 689 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 DMKNQ6E0U4 476 aaPredicted RBP18.84■□□□□ 0.61
LRRK1-208ENST00000532029 KCTD8Q6ZWB6 473 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 RNF170Q96K19 258 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 OR5M11Q96RB7 305 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 FN3KRPQ9HA64 309 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 GPR173Q9NS66 373 aa18.84■□□□□ 0.61
LRRK1-208ENST00000532029 LSM2Q9Y333 95 aaKnown RBP18.84■□□□□ 0.61
LRRK1-208ENST00000532029 LOC100289279A0A1B0GTE1 492 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 PNMA8CA0A1B0GUJ8 204 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 ANKRD61A6NGH8 418 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 TRIM64A6NGJ6 449 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 TRIM64BA6NI03 449 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 A6NLC8 198 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 LRRC30A6NM36 301 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 PPIHO43447 177 aaKnown RBP18.83■□□□□ 0.6
LRRK1-208ENST00000532029 GATBO75879 557 aaKnown RBP18.83■□□□□ 0.6
LRRK1-208ENST00000532029 IRF2P14316 349 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 MAP2K4P45985 399 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 ACSM1Q08AH1 577 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 CEACAM21Q3KPI0 293 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 TMEM42Q69YG0 159 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 SVOPQ8N4V2 548 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 OR51A4Q8NGJ6 313 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 OR11L1Q8NGX0 322 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 GPR148Q8TDV2 347 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 HPS1Q92902 700 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 FGGYQ96C11 551 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 TIMD4Q96H15 378 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 TMEM106BQ9NUM4 274 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 UFSP2Q9NUQ7 469 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 DHDHQ9UQ10 334 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 ZNF281Q9Y2X9 895 aa18.83■□□□□ 0.6
LRRK1-208ENST00000532029 TMEM210A6NLX4 147 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 PTBP3O95758 552 aaKnown RBP18.82■□□□□ 0.6
LRRK1-208ENST00000532029 CELP19835 753 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 RIN1Q13671 783 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 TBCEQ15813 527 aaPredicted RBP18.82■□□□□ 0.6
LRRK1-208ENST00000532029 PEG10Q86TG7 708 aaKnown RBP18.82■□□□□ 0.6
LRRK1-208ENST00000532029 OR1M1Q8NGA1 313 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 OR5A2Q8NGI9 324 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 ZNF420Q8TAQ5 688 aaPredicted RBP18.82■□□□□ 0.6
LRRK1-208ENST00000532029 HPSE2Q8WWQ2 592 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 PP6455Q8WZ26 134 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 GHSRQ92847 366 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 ADAT3Q96EY9 351 aaPredicted RBP18.82■□□□□ 0.6
LRRK1-208ENST00000532029 BPESC1Q9GZL8 116 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 CHST5Q9GZS9 411 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 LRCH1Q9Y2L9 728 aa18.82■□□□□ 0.6
LRRK1-208ENST00000532029 OR5B21A6NL26 309 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 VWC2LB2RUY7 222 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 ZNF732B4DXR9 585 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 NR4A2P43354 598 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 GPM6AP51674 278 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 GNG3P63215 75 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 MPPED2Q15777 294 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 C1orf87Q8N0U7 546 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 RAB1CQ92928 201 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 TECTBQ96PL2 329 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 REG4Q9BYZ8 158 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 C1orf123Q9NWV4 160 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 SLC7A11Q9UPY5 501 aa18.81■□□□□ 0.6
LRRK1-208ENST00000532029 RNF223E7ERA6 249 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms