RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 VENTXO95231 258 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 TBX6O95947 436 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 CYB5R3P00387 301 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 SNHG28P0DPA3 235 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 HRH1P35367 487 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 NR4A2P43354 598 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 NDUFA8P51970 172 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 RPL26P61254 145 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 OR2F1Q13607 317 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 TFDP2Q14188 446 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF169Q14929 603 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 ATP6AP1Q15904 470 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 CADM2Q8N3J6 435 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 NEXN-AS1Q8NBZ9 246 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 OR10G3Q8NGC4 313 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 OR5AR1Q8NGP9 310 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 OR8U1Q8NH10 309 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 OR56B4Q8NH76 319 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 IMP4Q96G21 291 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 MAGEB18Q96M61 343 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 COL21A1Q96P44 957 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 PDCD1LG2Q9BQ51 273 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 ATAD5Q96QE3 1844 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 NFAT5O94916 1531 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 GAGE12JA6NER3 117 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 M0QYV0 167 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 FABP7O15540 132 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 CDK2AP2O75956 126 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 SLC22A5O76082 557 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF806P0C7X5 589 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF250P15622 560 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 JUNBP17275 347 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 VEGFCP49767 419 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 PDLIM4P50479 330 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 NCALDP61601 193 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 COPZ1P61923 177 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 NUTF2P61970 127 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF235Q14590 738 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 HLA-DRB5Q30154 266 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 VAX1Q5SQQ9 334 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 TMEM135Q86UB9 458 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 CBLN2Q8IUK8 224 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 ODF3L1Q8IXM7 274 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 LRRC25Q8N386 305 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 LRRC18Q8N456 261 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 OR13D1Q8NGV5 346 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 TMEM174Q8WUU8 243 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 TCTEX1D2Q8WW35 142 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 CPNE2Q96FN4 548 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 CAPZA3Q96KX2 299 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF184Q99676 751 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 GABRG3Q99928 467 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 RASL11BQ9BPW5 248 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 MROQ9BYG7 248 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 ELOVL5Q9NYP7 299 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 GSKIPQ9P0R6 139 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 VPS29Q9UBQ0 182 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 SEC14L4Q9UDX3 406 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 FZD1Q9UP38 647 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 NTNG1Q9Y2I2 539 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 LAMB4A4D0S4 1761 aa4.39□□□□□ -1.71
ECHDC1-222ENST00000531967 IGLV3-22A0A075B6J6 115 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF816-ZNF321PA0A0X1KG74 233 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 C9orf170A2RU37 121 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 LEUTXA8MZ59 168 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF878C9JN71 531 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 SMKR1H3BMG3 65 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 FKBP6O75344 327 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 JTBO76095 146 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 SEC24AO95486 1093 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 BMP15O95972 392 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 IFNA10P01566 189 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CT45A6P0DMU7 189 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CT45A5P0DMU8 189 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CT45A7P0DMV0 189 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 HTR1EP28566 365 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 RPL12P30050 165 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 PTGDSP41222 190 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 MS4A2Q01362 244 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 ECH1Q13011 328 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 LRRC75BQ2VPJ9 315 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CT45A1Q5HYN5 189 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 OR2B11Q5JQS5 317 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF774Q6NX45 483 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 PRSS41Q7RTY9 318 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CEACAM19Q7Z692 300 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 C10orf107Q8IVU9 208 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 ARRDC1Q8N5I2 433 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 WDSUB1Q8N9V3 476 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CT45A3Q8NHU0 189 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 Q8WTZ3 238 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 IL1F10Q8WWZ1 152 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 CMTM7Q96FZ5 175 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 NODALQ96S42 347 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 ZNF442Q9H7R0 627 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 REEP1Q9H902 201 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 WDR41Q9HAD4 459 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 MEPEQ9NQ76 525 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 NIT2Q9NQR4 276 aa4.38□□□□□ -1.71
ECHDC1-222ENST00000531967 RSL24D1Q9UHA3 163 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms