RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 CRYGBP07316 175 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 NGFRP08138 427 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 CD14P08571 375 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 OR8U9P0C7N5 309 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 CT45A8P0DMV1 189 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 CT45A9P0DMV2 189 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 IRF1P10914 325 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 FGF5P12034 268 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 SLC25A4P12235 298 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 NCK1P16333 377 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 AKR1C4P17516 323 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 CXCL3P19876 107 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 MAOAP21397 527 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 CPT2P23786 658 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 GABRR2P28476 465 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 S100GP29377 79 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 RBMS1P29558 406 aaKnown RBP4.89□□□□□ -1.63
CD44-231ENST00000531110 SOAT1P35610 550 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 ST8SIA6P61647 398 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 H3F3AP84243 136 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 LTBQ06643 244 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 ZNF154Q13106 437 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 PCLAFQ15004 111 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 CT45A2Q5DJT8 189 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 GCSAMLQ5JQS6 135 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 TXNDC8Q6A555 127 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 ADNP2Q6IQ32 1131 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 LCTLQ6UWM7 567 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 ALKAL2Q6UX46 152 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 ZNF730Q6ZMV8 503 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 PAQR9Q6ZVX9 377 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 SLC25A26Q70HW3 274 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 ADCK2Q7Z695 626 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 IFNEQ86WN2 208 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 ZNF444Q8N0Y2 327 aaPredicted RBP4.89□□□□□ -1.63
CD44-231ENST00000531110 SLC35G3Q8N808 338 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 FADS6Q8N9I5 356 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 HJURPQ8NCD3 748 aaPredicted RBP4.89□□□□□ -1.63
CD44-231ENST00000531110 OR2AK2Q8NG84 335 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 OR10G3Q8NGC4 313 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 OR1S2Q8NGQ3 325 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 LMO3Q8TAP4 145 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 GPR146Q96CH1 333 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 RNF125Q96EQ8 232 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 CAPNS2Q96L46 248 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 HIST1H2BLQ99880 126 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 FAAP24Q9BTP7 215 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 ARL6Q9H0F7 186 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 PRO1933Q9H354 126 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 RBKSQ9H477 322 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 MOB1AQ9H8S9 216 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 PLEKHA1Q9HB21 404 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 SGK2Q9HBY8 427 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 EXOSC4Q9NPD3 245 aaKnown RBP4.89□□□□□ -1.63
CD44-231ENST00000531110 NOX4Q9NPH5 578 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 SLC2A8Q9NY64 477 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 PIPOXQ9P0Z9 390 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 CACFD1Q9UGQ2 172 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 CRLS1Q9UJA2 301 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 JPT1Q9UK76 154 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 HHLA2Q9UM44 414 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 NIP7Q9Y221 180 aaKnown RBP eCLIP4.89□□□□□ -1.63
CD44-231ENST00000531110 OR51B2Q9Y5P1 312 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 MON2Q7Z3U7 1717 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 UBR1Q8IWV7 1749 aa4.89□□□□□ -1.63
CD44-231ENST00000531110 ARFGEF2Q9Y6D5 1785 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 PPIAL4EA0A075B759 164 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 PPIAL4CA0A0B4J2A2 164 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 LOC285095A0A1B0GVY8 99 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 TCRBV9S1A1TA0A576 114 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 OR6C6A6NF89 314 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 GGT3PA6NGU5 568 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 YJEFN3A6XGL0 299 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 IDSB3KWA1 339 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 B4DEV8 164 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 PPIAL4DF5H284 164 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 G3V2L1 256 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 BCL2L11O43521 198 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 GSTZ1O43708 216 aaPredicted RBP4.88□□□□□ -1.63
CD44-231ENST00000531110 LANCL1O43813 399 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 SLC25A12O75746 678 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 ZNF432O94892 652 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 BRI3O95415 125 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 GPR75O95800 540 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 TXNDC12O95881 172 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 MT-ND4P03905 459 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 ARG1P05089 322 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 PPIAL4FP0DN26 164 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 ZNF35P13682 527 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 ACHEP22303 614 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 IDSP22304 550 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 HRH2P25021 359 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 NMBRP28336 390 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 SSTR1P30872 391 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 STK19P49842 368 aaPredicted RBP4.88□□□□□ -1.63
CD44-231ENST00000531110 PNLIPRP2P54317 469 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 DVL1P1P54792 670 aaPredicted RBP4.88□□□□□ -1.63
CD44-231ENST00000531110 UCP2P55851 309 aa4.88□□□□□ -1.63
CD44-231ENST00000531110 UFM1P61960 85 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms