RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 INS-IGF2F8WCM5 200 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 H7C2Y5 167 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 M0QXV9 152 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 NME4O00746 187 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 AQP9O43315 295 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 RP2O75695 350 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 GABARAPO95166 117 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 IGKV3-11P04433 115 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 BCHEP06276 602 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 EIF4EP06730 217 aaKnown RBP2.87□□□□□ -1.95
C11orf88-204ENST00000529661 KRT7P08729 469 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 OR8U9P0C7N5 309 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 MAGEA2P43356 314 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 RPL14P50914 215 aaKnown RBP2.87□□□□□ -1.95
C11orf88-204ENST00000529661 FABP6P51161 128 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 HCCSP53701 268 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 OR2B8PP59922 312 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 DSTNP60981 165 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 UBE2KP61086 200 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 MAGOHP61326 146 aaKnown RBP2.87□□□□□ -1.95
C11orf88-204ENST00000529661 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
C11orf88-204ENST00000529661 ERCC8Q13216 396 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 ITGB3BPQ13352 177 aaPredicted RBP2.87□□□□□ -1.95
C11orf88-204ENST00000529661 TPBGQ13641 420 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 EXOC3L4Q17RC7 722 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 RBM48Q5RL73 367 aaKnown RBP2.87□□□□□ -1.95
C11orf88-204ENST00000529661 SAPCD1Q5SSQ6 148 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 RESP18Q5W5W9 173 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 C12orf54Q6X4T0 127 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 NCCRP1Q6ZVX7 275 aaPredicted RBP2.87□□□□□ -1.95
C11orf88-204ENST00000529661 AHSA2Q719I0 299 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 BOD1L2Q8IYS8 172 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 WDR31Q8NA23 367 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 CHST4Q8NCG5 386 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 OR8U1Q8NH10 309 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 APH1BQ8WW43 257 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 BMFQ96LC9 184 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 OR2A5Q96R48 311 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 RSG1Q9BU20 258 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 C6orf50Q9HD87 102 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 EMC3Q9P0I2 261 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 TBX21Q9UL17 535 aa2.87□□□□□ -1.95
C11orf88-204ENST00000529661 ZNFX1Q9P2E3 1918 aaKnown RBP2.87□□□□□ -1.95
C11orf88-204ENST00000529661 GPATCH8Q9UKJ3 1502 aaKnown RBP2.87□□□□□ -1.95
C11orf88-204ENST00000529661 TMEM131Q92545 1883 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 IGLV4-69A0A075B6H9 119 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 IGLV1-50A0A075B6I6 118 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 TRAV8-7A0A075B6U6 113 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 ANKRD63C9JTQ0 380 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 DFFAO00273 331 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 ZW10O43264 779 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 CDC40O60508 579 aaKnown RBP eCLIP2.86□□□□□ -1.95
C11orf88-204ENST00000529661 GCGP01275 180 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 CTSLP07711 333 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 RD3LP0DJH9 198 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 PSKH1P11801 424 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 RAB3AP20336 220 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 USF1P22415 310 aaPredicted RBP2.86□□□□□ -1.95
C11orf88-204ENST00000529661 GNRHRP30968 328 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 RGS6P49758 472 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 MLF1P58340 268 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 PAFAH1B2P68402 229 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 ARG2P78540 354 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 RPL18AQ02543 176 aaKnown RBP2.86□□□□□ -1.95
C11orf88-204ENST00000529661 IFFO1Q0D2I5 559 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 DYNC1I2Q13409 638 aaKnown RBP2.86□□□□□ -1.95
C11orf88-204ENST00000529661 BSXQ3C1V8 233 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 COQ5Q5HYK3 327 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 MRPL55Q7Z7F7 128 aaKnown RBP2.86□□□□□ -1.95
C11orf88-204ENST00000529661 MRPL52Q86TS9 123 aaKnown RBP2.86□□□□□ -1.95
C11orf88-204ENST00000529661 SAXO1Q8IYX7 474 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 CA13Q8N1Q1 262 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 CBR4Q8N4T8 237 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 OR5AR1Q8NGP9 310 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 OR6Q1Q8NGQ2 317 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 OR5AK3PQ8NH89 298 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 ABHD3Q8WU67 409 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 PHF10Q8WUB8 498 aaKnown RBP2.86□□□□□ -1.95
C11orf88-204ENST00000529661 SCGB3A2Q96PL1 93 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 DCUN1D5Q9BTE7 237 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 ZNF426Q9BUY5 554 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 SLC17A9Q9BYT1 436 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 WDR55Q9H6Y2 383 aaPredicted RBP2.86□□□□□ -1.95
C11orf88-204ENST00000529661 METTL8Q9H825 291 aaKnown RBP2.86□□□□□ -1.95
C11orf88-204ENST00000529661 REEP1Q9H902 201 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 TMBIM4Q9HC24 238 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 CES1P1Q9UKY3 287 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 KIAA0232Q92628 1395 aa2.86□□□□□ -1.95
C11orf88-204ENST00000529661 ADAMTS13Q76LX8 1427 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 ARHGAP21Q5T5U3 1957 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 A0A0B4J2E0 115 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 ANKRD65E5RJM6 399 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 H7C417 338 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 ZNF593O00488 134 aaPredicted RBP2.85□□□□□ -1.95
C11orf88-204ENST00000529661 SULT1B1O43704 296 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 RCBTB2O95199 551 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 TNFAIP8O95379 198 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 SERPINA6P08185 405 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 CD3GP09693 182 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 PET100P0DJ07 73 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms