RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	ZNF845	Q96IR2	970 aa	Predicted RBP	12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	TSSK2	Q96PF2	358 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	INTS14	Q96SY0	518 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF416	Q9BWM5	594 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	PRELID3B	Q9Y3B1	194 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	IGKV3D-15	A0A087WSY6	115 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540		A0A0A6YYH2	397 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540		A6NJ64	397 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF724	A8MTY0	619 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	DOK2	O60496	412 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	KDM4B	O94953	1096 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	CD74	P04233	296 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	C2orf76	Q3KRA6	126 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	MEST	Q5EB52	335 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	PABPC1L2A	Q5JQF8	200 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	WDR38	Q5JTN6	314 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	NSUN5P2	Q63ZY6	315 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	UQCC3	Q6UW78	93 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	SLC35D2	Q76EJ3	337 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	STEAP2	Q8NFT2	490 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR9K2	Q8NGE7	335 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR10K1	Q8NGX5	313 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR6N2	Q8NGY6	317 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	SLC25A28	Q96A46	364 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	TSPAN32	Q96QS1	320 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	CHST6	Q9GZX3	395 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	PCDHB16	Q9NRJ7	776 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	PARPBP	Q9NWS1	579 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	B3GAT1	Q9P2W7	334 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	CLCF1	Q9UBD9	225 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF346	Q9UL40	294 aa	Known RBP	12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	TNFSF18	Q9UNG2	199 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	KCNK7	Q9Y2U2	307 aa		12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	MAP1B	P46821	2468 aa	Known RBP	12.8	□□□□□ -0.36
NR1H3-231	ENST00000529540	TVP23A	A6NH52	213 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	DCTN6	O00399	190 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	RAB3D	O95716	219 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	PLG	P00747	810 aa	Predicted RBP	12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	APOC3	P02656	99 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	HLA-G	P17693	338 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	FST	P19883	344 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZMYND11	Q15326	602 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	ACKR1	Q16570	336 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	C3AR1	Q16581	482 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	ACSF3	Q4G176	576 aa	Predicted RBP	12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF585A	Q6P3V2	769 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF546	Q86UE3	836 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	CCDC36	Q8IYA8	594 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR51A4	Q8NGJ6	313 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	FNDC9	Q8TBE3	224 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	ASB17	Q8WXJ9	295 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	SEH1L	Q96EE3	360 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	LRRC46	Q96FV0	321 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR8B4	Q96RC9	309 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	BCO1	Q9HAY6	547 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	SRA1	Q9HD15	236 aa	Known RBP	12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF835	Q9Y2P0	537 aa		12.79	□□□□□ -0.36
NR1H3-231	ENST00000529540	IGHV3-15	A0A0B4J1V0	119 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	KANTR	A0A1W2PQU2	76 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF726	A6NNF4	738 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF716	A6NP11	495 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	TRAF3IP2	O43734	574 aa	Predicted RBP	12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	ITGA5	P08648	1049 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	H2AFB1	P0C5Y9	115 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF735	P0CB33	412 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	MPZ	P25189	248 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	CD163	Q86VB7	1156 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	LINC00518	Q8N0U6	118 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	RELL2	Q8NC24	303 aa	Predicted RBP	12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	OR6X1	Q8NH79	312 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	OTOS	Q8NHW6	89 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	TSEN15	Q8WW01	171 aa	Known RBP	12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	ROBO4	Q8WZ75	1007 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	MARC2	Q969Z3	335 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	TMEM45B	Q96B21	275 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	TRIB1	Q96RU8	372 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	PURG	Q9UJV8	347 aa	Known RBP	12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZZEF1	O43149	2961 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	ATM	Q13315	3056 aa		12.78	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZNF814	B7Z6K7	855 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	TEX46	H3BTG2	121 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	IGHG1	P01857	330 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	CTAG1A	P78358	180 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	PRR30	Q53SZ7	412 aa	Predicted RBP	12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	C1orf185	Q5T7R7	199 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	ATPAF1	Q5TC12	328 aa	Predicted RBP	12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	C11orf87	Q6NUJ2	197 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	KDM8	Q8N371	416 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	BPIFC	Q8NFQ6	507 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	ABHD3	Q8WU67	409 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	ASB10	Q8WXI3	467 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	DVL3	Q92997	716 aa	Predicted RBP	12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	INTS12	Q96CB8	462 aa	Known RBP	12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	SLC25A44	Q96H78	314 aa	Predicted RBP	12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	ATG5	Q9H1Y0	275 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	PIGM	Q9H3S5	423 aa		12.77	□□□□□ -0.36
NR1H3-231	ENST00000529540	SLC2A8	Q9NY64	477 aa		12.77	□□□□□ -0.36

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