RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 FOXA2Q9Y261 457 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-212ENST00000529046 NOSIPQ9Y314 301 aaKnown RBP3.71□□□□□ -1.82
CSDE1-212ENST00000529046 ETV7Q9Y603 341 aa3.71□□□□□ -1.82
CSDE1-212ENST00000529046 CSPG4Q6UVK1 2322 aa3.71□□□□□ -1.82
CSDE1-212ENST00000529046 ATRQ13535 2644 aa3.71□□□□□ -1.82
CSDE1-212ENST00000529046 A0A096LPI6 279 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ARPC4-TTLL3A0A0A6YYG9 625 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 CIB4A0PJX0 185 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 E7EQL1 145 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 RPL36A-HNRNPH2H7BZ11 118 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 CLOCKO15516 846 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 GMFGO60234 142 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 RAMP1O60894 148 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 H6PDO95479 791 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 BPGMP07738 259 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ZCCHC18P0CG32 403 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 RPS4Y1P22090 263 aaKnown RBP3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ACAA2P42765 397 aaKnown RBP3.7□□□□□ -1.82
CSDE1-212ENST00000529046 CAMLGP49069 296 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 POLR2HP52434 150 aaKnown RBP3.7□□□□□ -1.82
CSDE1-212ENST00000529046 PRPS1P60891 318 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 SLC35A1P78382 337 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 GNA13Q14344 377 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 SPHARQ15513 63 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 MAPK14Q16539 360 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 TMEM249Q2WGJ8 235 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 C6orf52Q5T4I8 152 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ATAD3BQ5T9A4 648 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 PRAMEF8Q5VWM4 474 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 EMBQ6PCB8 327 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 CLEC2AQ6UVW9 174 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 LRRC74BQ6ZQY2 392 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ABHD12BQ7Z5M8 362 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-212ENST00000529046 CCDC36Q8IYA8 594 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 C4orf33Q8N1A6 199 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ARFGAP2Q8N6H7 521 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 KRTCAP2Q8N6L1 136 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 WDR31Q8NA23 367 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 OR5D16Q8NGK9 328 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 CLHC1Q8NHS4 586 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 TCP10LQ8TDR4 215 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 C10orf105Q8TEF2 133 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 LIPHQ8WWY8 451 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 SLC35B4Q969S0 331 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ROPN1LQ96C74 230 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 TUBGCP3Q96CW5 907 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 DDIT4LQ96D03 193 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ARL5BQ96KC2 179 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 CCDC115Q96NT0 180 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 S1PR3Q99500 378 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 RHOXF2Q9BQY4 288 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 LINC00470Q9BZP3 86 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 OR51I1Q9H343 314 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 GPN1Q9HCN4 374 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-212ENST00000529046 S100A14Q9HCY8 104 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 SLC17A5Q9NRA2 495 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 CTPS2Q9NRF8 586 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 YAE1D1Q9NRH1 226 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 THUMPD1Q9NXG2 353 aaKnown RBP3.7□□□□□ -1.82
CSDE1-212ENST00000529046 THYN1Q9P016 225 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ZNF319Q9P2F9 582 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 PSORS1C1Q9UIG5 152 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 BTNL2Q9UIR0 455 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 LAMP5Q9UJQ1 280 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 SLC9A8Q9Y2E8 581 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 WDR45Q9Y484 360 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 FLVCR1Q9Y5Y0 555 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 DSPPQ9NZW4 1301 aa3.7□□□□□ -1.82
CSDE1-212ENST00000529046 ROS1P08922 2347 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 USF3Q68DE3 2245 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 TMED7-TICAM2A0A0A6YYA0 188 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 IGHV3-15A0A0B4J1V0 119 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 LOC102725191A0A1B0GVB3 256 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 LOC390937A0A1W2PQ73 354 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 CCT8L1PA6NM43 557 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 A8MXK9 166 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 HMGN4O00479 90 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 TM9SF1O15321 606 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 CFLARO15519 480 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 NPIPB7O75200 414 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 IGKV3-15P01624 115 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 IGHV3-13P01766 116 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 SERPINE1P05121 402 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 UBTFL6P0CB48 400 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-212ENST00000529046 OR12D1P0DN82 309 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 UQCRBP14927 111 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 USF1P22415 310 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-212ENST00000529046 GATA2P23769 480 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-212ENST00000529046 IDH2P48735 452 aaKnown RBP3.69□□□□□ -1.82
CSDE1-212ENST00000529046 EVX1P49640 407 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 PPOXP50336 477 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 RPL14P50914 215 aaKnown RBP3.69□□□□□ -1.82
CSDE1-212ENST00000529046 SLC18A1P54219 525 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 SRPXP78539 464 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 FUT5Q11128 374 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 MRPL28Q13084 256 aaKnown RBP3.69□□□□□ -1.82
CSDE1-212ENST00000529046 TSC22D1Q15714 1073 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 STK11Q15831 433 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 TNFAIP8L3Q5GJ75 292 aa3.69□□□□□ -1.82
CSDE1-212ENST00000529046 PRAMEF7Q5VXH5 474 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms