RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 ZNF391Q9UJN7 358 aa10.3□□□□□ -0.76
USF1-208ENST00000528768 FOXD3Q9UJU5 478 aaPredicted RBP10.3□□□□□ -0.76
USF1-208ENST00000528768 PLEKHA6Q9Y2H5 1048 aa10.3□□□□□ -0.76
USF1-208ENST00000528768 MRPS28Q9Y2Q9 187 aaKnown RBP10.3□□□□□ -0.76
USF1-208ENST00000528768 HSPB11Q9Y547 144 aa10.3□□□□□ -0.76
USF1-208ENST00000528768 FLVCR1Q9Y5Y0 555 aa10.3□□□□□ -0.76
USF1-208ENST00000528768 SMAD9O15198 467 aaKnown RBP10.29□□□□□ -0.76
USF1-208ENST00000528768 CXCL13O43927 109 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 DOK2O60496 412 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 KDM4BO94953 1096 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 FARS2O95363 451 aaKnown RBP10.29□□□□□ -0.76
USF1-208ENST00000528768 SYNGR4O95473 234 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 MELTFP08582 738 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 GSTP1P09211 210 aaKnown RBP10.29□□□□□ -0.76
USF1-208ENST00000528768 GIPP09681 153 aaPredicted RBP10.29□□□□□ -0.76
USF1-208ENST00000528768 FREM3P0C091 2139 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 AGAP20933 346 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 DNASE1P24855 282 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 CBX5P45973 191 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 PLA2G7Q13093 441 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 ENDOGQ14249 297 aaKnown RBP10.29□□□□□ -0.76
USF1-208ENST00000528768 ZNF169Q14929 603 aaPredicted RBP10.29□□□□□ -0.76
USF1-208ENST00000528768 STK11Q15831 433 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 ACTBL2Q562R1 376 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 WIPI1Q5MNZ9 446 aaPredicted RBP10.29□□□□□ -0.76
USF1-208ENST00000528768 ZNF626Q68DY1 528 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 ABLIM2Q6H8Q1 611 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 RTL6Q6ICC9 239 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 RPUSD3Q6P087 351 aaKnown RBP10.29□□□□□ -0.76
USF1-208ENST00000528768 IGFL2Q6UWQ7 119 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 Q6ZTK2 550 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 CHMP1BQ7LBR1 199 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 MRGPRGQ86SM5 289 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 ANGPTL5Q86XS5 388 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 LYPD6Q86Y78 171 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 OR52N4Q8NGI2 321 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 OR56B1Q8NGI3 324 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 OR4D6Q8NGJ1 314 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 PRRT1Q99946 306 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 SRXN1Q9BYN0 137 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 CST11Q9H112 138 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 ALX4Q9H161 411 aaPredicted RBP10.29□□□□□ -0.76
USF1-208ENST00000528768 BEX1Q9HBH7 125 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 PLEK2Q9NYT0 353 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 MGAT4CQ9UBM8 478 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 MGAT4AQ9UM21 535 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 NPTNQ9Y639 398 aa10.29□□□□□ -0.76
USF1-208ENST00000528768 ZGRF1Q86YA3 2104 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 FAM221AA4D161 298 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 LRRC3CA6NJW4 275 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 DHRS7CA6NNS2 312 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 F5H5K5 113 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 M0R135 149 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 SGCEO43556 437 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 LMX1BO60663 402 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 CYTIPO60759 359 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 DHRS3O75911 302 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 CD3DP04234 171 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 PTHLHP12272 177 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 HOXB4P17483 251 aaPredicted RBP10.28□□□□□ -0.76
USF1-208ENST00000528768 RAD52P43351 418 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 SELENOPP49908 381 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 GNG2P59768 71 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 GUCA2AQ02747 115 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 PNLIPRP3Q17RR3 467 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 GFOD2Q3B7J2 385 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 NRN1LQ496H8 165 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 CDNFQ49AH0 187 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 RNASE10Q5GAN6 216 aaKnown RBP10.28□□□□□ -0.76
USF1-208ENST00000528768 GLIPR1L1Q6UWM5 242 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 UTS2BQ765I0 119 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 GGNQ86UU5 652 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 ZNF295-AS1Q8N0V1 137 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 ZIC4Q8N9L1 334 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 ACBD4Q8NC06 268 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 STEAP2Q8NFT2 490 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 BEST4Q8NFU0 473 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 OR2M7Q8NG81 312 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 OR10R2Q8NGX6 335 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 OR14K1Q8NGZ2 314 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 OR8S1Q8NH09 359 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 OR10D3Q8NH80 312 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 AQP3Q92482 292 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 NABP1Q96AH0 204 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 TMEM45BQ96B21 275 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 ZNF799Q96GE5 643 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 CLEC4MQ9H2X3 399 aaPredicted RBP10.28□□□□□ -0.76
USF1-208ENST00000528768 MYOZ1Q9NP98 299 aaPredicted RBP10.28□□□□□ -0.76
USF1-208ENST00000528768 NPDC1Q9NQX5 325 aaPredicted RBP10.28□□□□□ -0.76
USF1-208ENST00000528768 FLVCR2Q9UPI3 526 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 KLF13Q9Y2Y9 288 aaPredicted RBP10.28□□□□□ -0.76
USF1-208ENST00000528768 TIMM10BQ9Y5J6 103 aa10.28□□□□□ -0.76
USF1-208ENST00000528768 TMEM14DPA8MWL7 114 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 KLRC4-KLRK1H3BQV0 150 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 ZNF780AO75290 641 aaPredicted RBP10.27□□□□□ -0.77
USF1-208ENST00000528768 HPXP02790 462 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 CD74P04233 296 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 AMY2AP04746 511 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 IFNA6P05013 189 aa10.27□□□□□ -0.77
USF1-208ENST00000528768 HPNP05981 417 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms