RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 HDGFL3Q9Y3E1 203 aa12.97□□□□□ -0.33
CAPN1-214ENST00000528165 NPIPB7O75200 414 aa12.96□□□□□ -0.33
CAPN1-214ENST00000528165 CLINT1Q14677 625 aa12.96□□□□□ -0.33
CAPN1-214ENST00000528165 CHRFAM7AQ494W8 412 aa12.96□□□□□ -0.33
CAPN1-214ENST00000528165 OR51E1Q8TCB6 317 aa12.96□□□□□ -0.33
CAPN1-214ENST00000528165 GPER1Q99527 375 aa12.96□□□□□ -0.33
CAPN1-214ENST00000528165 ARV1Q9H2C2 271 aa12.96□□□□□ -0.33
CAPN1-214ENST00000528165 GFOD1Q9NXC2 390 aa12.96□□□□□ -0.33
CAPN1-214ENST00000528165 TUBD1Q9UJT1 453 aa12.96□□□□□ -0.33
CAPN1-214ENST00000528165 MKI67P46013 3256 aaKnown RBP12.96□□□□□ -0.33
CAPN1-214ENST00000528165 CDC14CA4D256 554 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 FRG2CA6NGY1 282 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 TNFRSF10CO14798 259 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 NSA2O95478 260 aaKnown RBP12.96□□□□□ -0.34
CAPN1-214ENST00000528165 HCKP08631 526 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 NOGQ13253 232 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 SOHLH1Q5JUK2 328 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 SGPP2Q8IWX5 399 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 SLC37A2Q8TED4 501 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 FAM131CQ96AQ9 280 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 C1orf147Q96MC9 270 aaPredicted RBP12.96□□□□□ -0.34
CAPN1-214ENST00000528165 RNF208Q9H0X6 261 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 PARPBPQ9NWS1 579 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 SUSD2Q9UGT4 822 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 DNAH14Q0VDD8 3507 aa12.96□□□□□ -0.34
CAPN1-214ENST00000528165 LINC01553A4QN01 128 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 IFITM10A6NMD0 228 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 C1QL1O75973 258 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 GGNBP1Q5YKI7 109 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 YAF2Q8IY57 180 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 PTPMT1Q8WUK0 201 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-214ENST00000528165 STRAPQ9Y3F4 350 aaKnown RBP12.95□□□□□ -0.34
CAPN1-214ENST00000528165 IGKV1D-43A0A0B4J1Z2 117 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 A0A1B0GV50 99 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 GPR37O15354 613 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 GALNSP34059 522 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 SUCLG1P53597 346 aaKnown RBP12.95□□□□□ -0.34
CAPN1-214ENST00000528165 Q3ZCU0 254 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 SULF2Q8IWU5 870 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 SUMF2Q8NBJ7 301 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 ASB10Q8WXI3 467 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 MR1Q95460 341 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 SGK3Q96BR1 496 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 OR10A2Q9H208 303 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 DOK5Q9P104 306 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 PTPRSQ13332 1948 aa12.95□□□□□ -0.34
CAPN1-214ENST00000528165 E5RGE8 158 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 TDGQ13569 410 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 CDPF1Q6NVV7 123 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 OR5AS1Q8N127 324 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 OR51T1Q8NGJ9 327 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 MFSD8Q8NHS3 518 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 ZDHHC12Q96GR4 267 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 YPEL4Q96NS1 127 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 GINS3Q9BRX5 216 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 NSG2Q9Y328 171 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 MMP24Q9Y5R2 645 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 ZNF878C9JN71 531 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 H7C1Q1 480 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 IL11P20809 199 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 FCARP24071 287 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 P2RY1P47900 373 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 DAP3P51398 398 aaKnown RBP12.94□□□□□ -0.34
CAPN1-214ENST00000528165 SSX9Q7RTT3 188 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 ABHD12BQ7Z5M8 362 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-214ENST00000528165 LFNGQ8NES3 379 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 MRPL24Q96A35 216 aaKnown RBP12.94□□□□□ -0.34
CAPN1-214ENST00000528165 S100PBPQ96BU1 408 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 BSCL2Q96G97 398 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-214ENST00000528165 RHOVQ96L33 236 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 CPAMD8Q8IZJ3 1885 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 MASP2O00187 686 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 POU2F2P09086 479 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 ACY1Q03154 408 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 ZNF674Q2M3X9 581 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 ZNF574Q6ZN55 896 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-214ENST00000528165 GRINAQ7Z429 371 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 TMEM151BQ8IW70 566 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 TMEM156Q8N614 296 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 C11orf40Q8WZ69 217 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 OBP2AQ9NY56 170 aa12.94□□□□□ -0.34
CAPN1-214ENST00000528165 ALG1L2C9J202 215 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 HNRNPA2B1P22626 353 aaKnown RBP12.93□□□□□ -0.34
CAPN1-214ENST00000528165 DBX2Q6ZNG2 339 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 ZNF610Q8N9Z0 462 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 OR10D4PQ8NGN7 298 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 GTF3AQ92664 365 aaKnown RBP12.93□□□□□ -0.34
CAPN1-214ENST00000528165 MUCL1Q96DR8 90 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 KCNK17Q96T54 332 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 PIGQQ9BRB3 760 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 SH3BGRL3Q9H299 93 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 WFDC1Q9HC57 220 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 ZNF701Q9NV72 531 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-214ENST00000528165 ATXN7L1Q9ULK2 861 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-214ENST00000528165 MED19A0JLT2 244 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-214ENST00000528165 SERPINA2P20848 420 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 ECI1P42126 302 aa12.93□□□□□ -0.34
CAPN1-214ENST00000528165 KIR2DL1P43626 348 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-214ENST00000528165 POU3F1Q03052 451 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-214ENST00000528165 TMEM196Q5HYL7 178 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms