RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 ATF6BQ99941 703 aa10.65□□□□□ -0.7
SSRP1-203ENST00000526696 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.65□□□□□ -0.7
SSRP1-203ENST00000526696 GRHPRQ9UBQ7 328 aa10.65□□□□□ -0.7
SSRP1-203ENST00000526696 HILPDAQ9Y5L2 63 aa10.65□□□□□ -0.7
SSRP1-203ENST00000526696 IGLV1-36A0A0B4J1U3 117 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 MYF6P23409 242 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 SLC6A1P30531 599 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 GABRA2P47869 451 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 DLX6P56179 175 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 STX1BP61266 288 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 SPIBQ01892 262 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 ZNF273Q14593 569 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 DEFB136Q30KP8 78 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 RFX4Q33E94 735 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 ZNF626Q68DY1 528 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 PTCHD4Q6ZW05 846 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 GATAD1Q8WUU5 269 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 OR52B2Q96RD2 323 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 PITX2Q99697 317 aa10.64□□□□□ -0.71
SSRP1-203ENST00000526696 VPS13DQ5THJ4 4388 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 PKHD1P08F94 4074 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 OR2AT4A6NND4 320 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 M0R135 149 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 XKRYO14609 159 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 AKR7A2O43488 359 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 CD14P08571 375 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 VIMP08670 466 aaKnown RBP10.63□□□□□ -0.71
SSRP1-203ENST00000526696 MDH1P40925 334 aaKnown RBP10.63□□□□□ -0.71
SSRP1-203ENST00000526696 SLC9A3P48764 834 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 TPTEP56180 551 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 SLC34A1Q06495 639 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 ZNF770Q6IQ21 691 aaPredicted RBP10.63□□□□□ -0.71
SSRP1-203ENST00000526696 BLOC1S3Q6QNY0 202 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 C16orf82Q7Z2V1 217 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 FUNDC1Q8IVP5 155 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 ZNF695Q8IW36 515 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 DPP10Q8N608 796 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 C11orf65Q8NCR3 313 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 OR4M1Q8NGD0 313 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 OR5M8Q8NGP6 311 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 OR10Z1Q8NGY1 313 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 LINC00476Q8WZB0 136 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 RPL3LQ92901 407 aaKnown RBP10.63□□□□□ -0.71
SSRP1-203ENST00000526696 ZNF799Q96GE5 643 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 ZNF570Q96NI8 536 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 NMNAT1Q9HAN9 279 aaPredicted RBP10.63□□□□□ -0.71
SSRP1-203ENST00000526696 LIN7BQ9HAP6 207 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 NKIRAS1Q9NYS0 192 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 USE1Q9NZ43 259 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 NLKQ9UBE8 527 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 LRP12Q9Y561 859 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 LYVE1Q9Y5Y7 322 aa10.63□□□□□ -0.71
SSRP1-203ENST00000526696 EVPLLA8MZ36 301 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 PRR23D1E9PI22 279 aaPredicted RBP10.62□□□□□ -0.71
SSRP1-203ENST00000526696 PGA5P0DJD9 388 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 PRR23D2P0DMB1 279 aaPredicted RBP10.62□□□□□ -0.71
SSRP1-203ENST00000526696 PSG2P11465 335 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 SNRPBP14678 240 aaKnown RBP10.62□□□□□ -0.71
SSRP1-203ENST00000526696 OR3A4PP47883 348 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 RPL31P62899 125 aaKnown RBP10.62□□□□□ -0.71
SSRP1-203ENST00000526696 KRR1Q13601 381 aaKnown RBP10.62□□□□□ -0.71
SSRP1-203ENST00000526696 ZNF260Q3ZCT1 412 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 EPGNQ6UW88 154 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 C16orf89Q6UX73 402 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 OAFQ86UD1 273 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 NRMQ8IXM6 262 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 FAM156AQ8NDB6 213 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 OR11H6Q8NGC7 330 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 NOL4LQ96MY1 436 aaPredicted RBP10.62□□□□□ -0.71
SSRP1-203ENST00000526696 SLC25A33Q9BSK2 321 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 FGF23Q9GZV9 251 aaPredicted RBP10.62□□□□□ -0.71
SSRP1-203ENST00000526696 ZFP57Q9NU63 452 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 FAM53CQ9NYF3 392 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 SH3GLB1Q9Y371 365 aa10.62□□□□□ -0.71
SSRP1-203ENST00000526696 C17orf98A8MV24 154 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 CDC42EP2O14613 210 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 TIPRLO75663 272 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 OTX1P32242 354 aaPredicted RBP10.61□□□□□ -0.71
SSRP1-203ENST00000526696 CENPAP49450 140 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 OR12D2P58182 307 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 NFYCQ13952 458 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 SEC23BQ15437 767 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 SPDL1Q96EA4 605 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 SDSLQ96GA7 329 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 C7orf26Q96N11 449 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 SP140LQ9H930 580 aa10.61□□□□□ -0.71
SSRP1-203ENST00000526696 TRIM64CA6NLI5 447 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 ANKRD30BLA7E2S9 258 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 EFCAB9A8MZ26 197 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 SOCS2O14508 198 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 SLC2A1P11166 492 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 CDKN2AP42771 156 aaKnown RBP10.6□□□□□ -0.71
SSRP1-203ENST00000526696 OR1E2P47887 323 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 KRT72Q14CN4 511 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 ANKDD1AQ495B1 522 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 C9orf152Q5JTZ5 239 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 DLEU7Q6UYE1 221 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 PATL1Q86TB9 770 aaKnown RBP10.6□□□□□ -0.71
SSRP1-203ENST00000526696 SPSB4Q96A44 273 aa10.6□□□□□ -0.71
SSRP1-203ENST00000526696 CCDC28BQ9BUN5 200 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms