RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 Q3ZCU0 254 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 ORMDL2Q53FV1 153 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 C16orf87Q6PH81 154 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 TMPRSS11AQ6ZMR5 421 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 FAM92BQ6ZTR7 304 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 ST13P4Q8IZP2 240 aaPredicted RBP2.73□□□□□ -1.97
CD44-223ENST00000526553 LINC00469Q8N7U9 141 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 OR11H7Q8NGC8 314 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 OR10AD1Q8NGE0 317 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 OR4A15Q8NGL6 344 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 OR8U1Q8NH10 309 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 LRRC29Q8WV35 223 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 TMEM158Q8WZ71 300 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 RGP1Q92546 391 aaPredicted RBP2.73□□□□□ -1.97
CD44-223ENST00000526553 ZNF681Q96N22 645 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 NAA50Q9GZZ1 169 aaKnown RBP2.73□□□□□ -1.97
CD44-223ENST00000526553 SAV1Q9H4B6 383 aaPredicted RBP2.73□□□□□ -1.97
CD44-223ENST00000526553 RPP21Q9H633 154 aaKnown RBP2.73□□□□□ -1.97
CD44-223ENST00000526553 CRB1P82279 1406 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 TULP4Q9NRJ4 1543 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 LMO7Q8WWI1 1683 aa2.73□□□□□ -1.97
CD44-223ENST00000526553 MN1Q10571 1320 aaPredicted RBP2.72□□□□□ -1.97
CD44-223ENST00000526553 IGHV5-51A0A0C4DH38 117 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 GOLGA8JA6NMD2 632 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 TMX2-CTNND1H3BSU7 103 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 H7C417 338 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 M0QX08 132 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 GABRPO00591 440 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 NVLO15381 856 aaKnown RBP2.72□□□□□ -1.97
CD44-223ENST00000526553 YKT6O15498 198 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 CD5LO43866 347 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 OXTP01178 125 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 GOLGA8HP0CJ92 632 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 PGA4P0DJD7 388 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 PGA3P0DJD8 388 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 PGA5P0DJD9 388 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 PRPS2P11908 318 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 TCN2P20062 427 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 MAGP20916 626 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 CCNOP22674 350 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 PPICP45877 212 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 RAB7AP51149 207 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 TAS2R60P59551 318 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 OR2B8PP59922 312 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 RPS23P62266 143 aaKnown RBP2.72□□□□□ -1.97
CD44-223ENST00000526553 EIF4EBP1Q13541 118 aaPredicted RBP2.72□□□□□ -1.97
CD44-223ENST00000526553 RGNQ15493 299 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 UBE2SQ16763 222 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 QSER1Q2KHR3 1735 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 CCDC88AQ3V6T2 1871 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 TCEAL5Q5H9L2 206 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 AVPI1Q5T686 147 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 ASCL4Q6XD76 172 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 ZFP2Q6ZN57 461 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 SNX20Q7Z614 316 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 SAXO1Q8IYX7 474 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 COX18Q8N8Q8 333 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 UBAC2Q8NBM4 344 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 C11orf72Q8NBR9 251 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 OR10W1Q8NGF6 305 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 OR10Z1Q8NGY1 313 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 OR10G6Q8NH81 332 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 LRRC20Q8TCA0 184 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 ASZ1Q8WWH4 475 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 TCEAL3Q969E4 200 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 TM4SF18Q96CE8 201 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 SGTBQ96EQ0 304 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 WDR90Q96KV7 1748 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 BMFQ96LC9 184 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 GLT1D1Q96MS3 346 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 RNF145Q96MT1 663 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 CHAC1Q9BUX1 264 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 SCRT1Q9BWW7 348 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 REEP1Q9H902 201 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 NOX3Q9HBY0 568 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 SLC40A1Q9NP59 571 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 MYOZ1Q9NP98 299 aaPredicted RBP2.72□□□□□ -1.97
CD44-223ENST00000526553 MTFP1Q9UDX5 166 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 HYOU1Q9Y4L1 999 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 NHSQ6T4R5 1651 aa2.72□□□□□ -1.97
CD44-223ENST00000526553 MROH7Q68CQ1 1323 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 ARHGEF28Q8N1W1 1705 aaKnown RBP2.71□□□□□ -1.98
CD44-223ENST00000526553 PIK3C2GO75747 1445 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 LRCOL1A6NCL2 159 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 GMDSO60547 372 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 SLC16A7O60669 478 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 RP2O75695 350 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 PLEKHA8P1O95397 391 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 BCHEP06276 602 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 RBM34P42696 430 aaKnown RBP2.71□□□□□ -1.98
CD44-223ENST00000526553 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 RPL18AQ02543 176 aaKnown RBP2.71□□□□□ -1.98
CD44-223ENST00000526553 SLAQ13239 276 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 ATP6V1FQ16864 119 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 GCSAMLQ5JQS6 135 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 PLET1Q6UQ28 207 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 NDUFAF7Q7L592 441 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 Q8N976 141 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 OR5AR1Q8NGP9 310 aa2.71□□□□□ -1.98
CD44-223ENST00000526553 OR8D1Q8WZ84 308 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms