RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 OR1M1Q8NGA1 313 aa14.52□□□□□ -0.09
LMX1B-203ENST00000526117 HPSE2Q8WWQ2 592 aa14.52□□□□□ -0.09
LMX1B-203ENST00000526117 ZNF665Q9H7R5 613 aa14.52□□□□□ -0.09
LMX1B-203ENST00000526117 DCAF16Q9NXF7 216 aa14.52□□□□□ -0.09
LMX1B-203ENST00000526117 TREM2Q9NZC2 230 aa14.52□□□□□ -0.09
LMX1B-203ENST00000526117 FRRS1LQ9P0K9 344 aa14.52□□□□□ -0.09
LMX1B-203ENST00000526117 PSORS1C1Q9UIG5 152 aa14.52□□□□□ -0.09
LMX1B-203ENST00000526117 GTF2A1LQ9UNN4 478 aa14.52□□□□□ -0.09
LMX1B-203ENST00000526117 PIGLQ9Y2B2 252 aa14.52□□□□□ -0.09
LMX1B-203ENST00000526117 CAB39Q9Y376 341 aaPredicted RBP14.52□□□□□ -0.09
LMX1B-203ENST00000526117 EXOSC1Q9Y3B2 195 aaKnown RBP14.52□□□□□ -0.09
LMX1B-203ENST00000526117 NIPBLQ6KC79 2804 aaeCLIP14.51□□□□□ -0.09
LMX1B-203ENST00000526117 A0A1B0GVI7 797 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 OR5B21A6NL26 309 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 J3QLW9 94 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 P2RY10O00398 339 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 HTR1AP08908 422 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 IRF2P14316 349 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 ZNF19P17023 458 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 IL2RGP31785 369 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 NANOS3P60323 173 aaKnown RBP14.51□□□□□ -0.09
LMX1B-203ENST00000526117 ZNF154Q13106 437 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 MED21Q13503 144 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 ZMYND11Q15326 602 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 MPPED2Q15777 294 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 CCDC58Q4VC31 144 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 CLVS2Q5SYC1 327 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 AVPI1Q5T686 147 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 PRAMEF6Q5VXH4 476 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 WDR86Q86TI4 376 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 LINC01356Q8N9X3 169 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 OR5A2Q8NGI9 324 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 ZNF420Q8TAQ5 688 aaPredicted RBP14.51□□□□□ -0.09
LMX1B-203ENST00000526117 DVL3Q92997 716 aaPredicted RBP14.51□□□□□ -0.09
LMX1B-203ENST00000526117 MSI2Q96DH6 328 aaKnown RBP14.51□□□□□ -0.09
LMX1B-203ENST00000526117 FKBP14Q9NWM8 211 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 RNF7Q9UBF6 113 aa14.51□□□□□ -0.09
LMX1B-203ENST00000526117 OR4C45A6NMZ5 311 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 ZNF850A8MQ14 1090 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 B4DSR2 109 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 F5H0A9 414 aaPredicted RBP14.5□□□□□ -0.09
LMX1B-203ENST00000526117 SYT7O43581 403 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 LHBP01229 141 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 FAHP16930 419 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 MYL12AP19105 171 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 MYF6P23409 242 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 PSMB10P40306 273 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 ALKBH1Q13686 389 aaKnown RBP14.5□□□□□ -0.09
LMX1B-203ENST00000526117 C11orf53Q8IXP5 236 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 OR52N1Q8NH53 320 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 RPS4Y2Q8TD47 263 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 PIGCQ92535 297 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 GGHQ92820 318 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 TMEM80Q96HE8 168 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 TECTBQ96PL2 329 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 HIST1H2AAQ96QV6 131 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 ISG20L2Q9H9L3 353 aaKnown RBP14.5□□□□□ -0.09
LMX1B-203ENST00000526117 TRIM36Q9NQ86 728 aa14.5□□□□□ -0.09
LMX1B-203ENST00000526117 C2CD3Q4AC94 2353 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 PPIAL4EA0A075B759 164 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 LOC107986453A0A1B0GWG9 222 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 PPIAL4DF5H284 164 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 CYB5R3P00387 301 aaPredicted RBP14.49□□□□□ -0.09
LMX1B-203ENST00000526117 NRASP01111 189 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 CCDC159P0C7I6 412 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 PPIAL4FP0DN26 164 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 ETV1P50549 477 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 GBX2P52951 348 aaPredicted RBP14.49□□□□□ -0.09
LMX1B-203ENST00000526117 GNG3P63215 75 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 ZNF404Q494X3 552 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 RNLSQ5VYX0 342 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 FAM166AQ6J272 317 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 IZUMO2Q6UXV1 221 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 TMPRSS11AQ6ZMR5 421 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 KLHL36Q8N4N3 616 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 OR10Z1Q8NGY1 313 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 GAL3ST1Q99999 423 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 FGF23Q9GZV9 251 aaPredicted RBP14.49□□□□□ -0.09
LMX1B-203ENST00000526117 PPP1R3EQ9H7J1 279 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 UFSP2Q9NUQ7 469 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 RRP15Q9Y3B9 282 aaKnown RBP14.49□□□□□ -0.09
LMX1B-203ENST00000526117 PPIAL4AQ9Y536 164 aa14.49□□□□□ -0.09
LMX1B-203ENST00000526117 TMEM212A6NML5 194 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 A8MV72 311 aaPredicted RBP14.48□□□□□ -0.09
LMX1B-203ENST00000526117 GRPP07492 148 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 ZNF16P17020 682 aaPredicted RBP14.48□□□□□ -0.09
LMX1B-203ENST00000526117 THBS2P35442 1172 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 VHLP40337 213 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 DVL1P1P54792 670 aaPredicted RBP14.48□□□□□ -0.09
LMX1B-203ENST00000526117 ST3GAL4Q11206 333 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 KCNJ8Q15842 424 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 C6orf141Q5SZD1 244 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 TEX36Q5VZQ5 186 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 WDR82Q6UXN9 313 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 GCSAMQ8N6F7 178 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 ZNF485Q8NCK3 441 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 PP6455Q8WZ26 134 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 CHST5Q9GZS9 411 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 PLEKHA1Q9HB21 404 aa14.48□□□□□ -0.09
LMX1B-203ENST00000526117 PATZ1Q9HBE1 687 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms