RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 TMEM185BQ9H7F4 350 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 FN3KRPQ9HA64 309 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 TAS2R3Q9NYW6 316 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 COMMD9Q9P000 198 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 KLHL13Q9P2N7 655 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 MBD2Q9UBB5 411 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 RAB22AQ9UL26 194 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 HHLA2Q9UM44 414 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 NOP16Q9Y3C1 178 aaKnown RBP6.9□□□□□ -1.3
SPIDR-223ENST00000524033 MMACHCQ9Y4U1 282 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 SDK2Q58EX2 2172 aa6.9□□□□□ -1.3
SPIDR-223ENST00000524033 COL6A6A6NMZ7 2263 aa6.9□□□□□ -1.31
SPIDR-223ENST00000524033 FER1L5A0AVI2 2057 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 PQLC2LA1A4F0 135 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 CLEC18AA5D8T8 446 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 TMEM235A6NFC5 223 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 OR2AT4A6NND4 320 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 TMEM14DPA8MWL7 114 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ALG1L2C9J202 215 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 FTCDNL1E5RQL4 147 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 H0YIG0 161 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 H3BSH0 61 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 SCDO00767 359 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 CLDN4O14493 209 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 PLPP3O14495 311 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ICOSLGO75144 302 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 KLF7O75840 302 aaPredicted RBP6.89□□□□□ -1.31
SPIDR-223ENST00000524033 CEACAM4O75871 244 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 SCGNO76038 276 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 DUS4LO95620 317 aaKnown RBP6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ACTL6AO96019 429 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 PLATP00750 562 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 HEXAP06865 529 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 SPARCP09486 303 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ABCD3P28288 659 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 OTX2P32243 289 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 RFC3P40938 356 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 STARP49675 285 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 CCR4P51679 360 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 RRADP55042 308 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 SLC26A5P58743 744 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 TAS2R31P59538 309 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 IL15RAQ13261 267 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 UNC119Q13432 240 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 EIF2B1Q14232 305 aaKnown RBP6.89□□□□□ -1.31
SPIDR-223ENST00000524033 SSPNQ14714 243 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 TOMM34Q15785 309 aaPredicted RBP6.89□□□□□ -1.31
SPIDR-223ENST00000524033 GUCA2BQ16661 112 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ODF4Q2M2E3 257 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 RNASE10Q5GAN6 216 aaKnown RBP6.89□□□□□ -1.31
SPIDR-223ENST00000524033 TMEM244Q5VVB8 128 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 NSUN5P2Q63ZY6 315 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 CLEC18BQ6UXF7 455 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 IL34Q6ZMJ4 242 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 SLC35D2Q76EJ3 337 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ZNF627Q7L945 461 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 TMED4Q7Z7H5 227 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 HOGA1Q86XE5 327 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ZNF441Q8N8Z8 693 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 CLEC18CQ8NCF0 446 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 FDCSPQ8NFU4 85 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 SLC26A10Q8NG04 563 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 OR4A4PQ8NGN8 299 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 CPT1CQ8TCG5 803 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ADAMTS17Q8TE56 1095 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ZNF721Q8TF20 911 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 METTL21AQ8WXB1 218 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 FAM46BQ96A09 425 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 NARS2Q96I59 477 aaKnown RBP6.89□□□□□ -1.31
SPIDR-223ENST00000524033 IP6K3Q96PC2 410 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 NKX3-1Q99801 234 aaPredicted RBP6.89□□□□□ -1.31
SPIDR-223ENST00000524033 RNF126Q9BV68 326 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ZNF471Q9BX82 626 aaPredicted RBP6.89□□□□□ -1.31
SPIDR-223ENST00000524033 NMES1Q9C002 83 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 ACKR4Q9NPB9 350 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 COA4Q9NYJ1 87 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 TMED7Q9Y3B3 224 aa6.89□□□□□ -1.31
SPIDR-223ENST00000524033 CRYBG3Q68DQ2 2970 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 TMED7-TICAM2A0A0A6YYA0 188 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 OR2W5A6NFC9 320 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 ZNF98A6NK75 572 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 C17orf105B2RV13 164 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 C11orf98E9PRG8 122 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 H0YIZ8 118 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 H3BMH7 237 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 GPR31O00270 319 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 XKRYO14609 159 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 LMX1BO60663 402 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 SLC16A7O60669 478 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 IGHEP01854 428 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 FAM157CP0CG43 387 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 GP1BBP13224 206 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 TPT1P13693 172 aaKnown RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 GNLYP22749 145 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 CRABP1P29762 137 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 CX3CR1P49238 355 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 POLR2HP52434 150 aaKnown RBP6.88□□□□□ -1.31
SPIDR-223ENST00000524033 EFNA3P52797 238 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 DCAF7P61962 342 aa6.88□□□□□ -1.31
SPIDR-223ENST00000524033 DEFA5Q01523 94 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms