RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	SLC38A2	Q96QD8	506 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	FRG2B	Q96QU4	278 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	GFI1	Q99684	422 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	PRRT1	Q99946	306 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	TMEM204	Q9BSN7	226 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	UGT2B28	Q9BY64	529 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	ULBP2	Q9BZM5	246 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	CHRNA10	Q9GZZ6	450 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	SLITRK2	Q9H156	845 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	KAT8	Q9H7Z6	458 aa	Known RBP	4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	SIRT7	Q9NRC8	400 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	NUDT4	Q9NZJ9	180 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	CLN8	Q9UBY8	286 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	RIMS3	Q9UJD0	308 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	IKZF2	Q9UKS7	526 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	FBXL3	Q9UKT7	428 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	PPP1R3C	Q9UQK1	317 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	SLC22A13	Q9Y226	551 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	B3GALT5	Q9Y2C3	310 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	GSTK1	Q9Y2Q3	226 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	DNAJC15	Q9Y5T4	150 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	AUP1	Q9Y679	476 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	DNAH6	Q9C0G6	4158 aa		4.36	□□□□□ -1.71
PABPC1-223	ENST00000523636	SCN3A	Q9NY46	2000 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	KCNE1B	A0A087WTH5	132 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	DHRS12	A0PJE2	317 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	FAM172BP	A6NC97	362 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	LRRC3C	A6NJW4	275 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZNF98	A6NK75	572 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	C2orf74	A8MZ97	194 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	RGS14	O43566	566 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	TSPAN2	O60636	221 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	TPST2	O60704	377 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	RBMXL2	O75526	392 aa	Known RBP	4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	SC5D	O75845	299 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	WISP3	O95389	354 aa	Predicted RBP	4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	IGLV2-14	P01704	120 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	CD8A	P01732	235 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	IGHV2-70	P01814	119 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	HLA-DQA2	P01906	255 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	SERPINA5	P05154	406 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	GP9	P14770	177 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZNF23	P17027	643 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	TSPAN8	P19075	237 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	DCK	P27707	260 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	TIMP3	P35625	211 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	MAP3K8	P41279	467 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	HOXA1	P49639	335 aa	Predicted RBP	4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	POLR2J	P52435	117 aa	Known RBP	4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	PLA2G16	P53816	162 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	AP1S1	P61966	158 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ERVK-8	P63133	956 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	EMX2	Q04743	252 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	FAM27E3	Q08E93	113 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	BAMBI	Q13145	260 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	EXOSC7	Q15024	291 aa	Known RBP	4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	PON3	Q15166	354 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	TTLL9	Q3SXZ7	439 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	VPS26B	Q4G0F5	336 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ACSF3	Q4G176	576 aa	Predicted RBP	4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ATP6AP1L	Q52LC2	224 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	TMEM35A	Q53FP2	167 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	UTF1	Q5T230	341 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	HIST2H2AA3	Q6FI13	130 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	LCN8	Q6JVE9	175 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	REEP3	Q6NUK4	255 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	USP43	Q70EL4	1123 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZNF550	Q7Z398	422 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	HDDC2	Q7Z4H3	204 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	HS3ST5	Q8IZT8	346 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	SPAG16	Q8N0X2	631 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZFP82	Q8N141	532 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	PGBD5	Q8N414	524 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	DHRSX	Q8N5I4	330 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	LMNTD1	Q8N9Z9	388 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	B3GNT7	Q8NFL0	401 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR4K2	Q8NGD2	314 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	OR5T2	Q8NGG2	359 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	FAM110B	Q8TC76	370 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	FCAMR	Q8WWV6	532 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	HGD	Q93099	445 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	CXorf58	Q96LI9	332 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	PPP3R2	Q96LZ3	170 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ZNF285	Q96NJ3	590 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ATOH8	Q96SQ7	321 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	RHNO1	Q9BSD3	238 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	DCUN1D5	Q9BTE7	237 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	FUNDC2	Q9BWH2	189 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	BCL2L14	Q9BZR8	327 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	TMPRSS5	Q9H3S3	457 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	MAGIX	Q9H6Y5	334 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	ANKH	Q9HCJ1	492 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	CUTC	Q9NTM9	273 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	CMTM6	Q9NX76	183 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	C1RL	Q9NZP8	487 aa		4.35	□□□□□ -1.71
PABPC1-223	ENST00000523636	DHRS7	Q9Y394	339 aa		4.35	□□□□□ -1.71

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