RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 LY86O95711 162 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 AMY1AP04745 511 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 AMY2AP04746 511 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 PGA5P0DJD9 388 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 DDOSTP39656 456 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 CENPAP49450 140 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 RPL31P62899 125 aaKnown RBP10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 SLC34A1Q06495 639 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 ZNF770Q6IQ21 691 aaPredicted RBP10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 BLOC1S3Q6QNY0 202 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 PTCHD4Q6ZW05 846 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 EGFL6Q8IUX8 553 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 NRMQ8IXM6 262 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 OR5M8Q8NGP6 311 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 RASSF5Q8WWW0 418 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 SPDL1Q96EA4 605 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 AKR1E2Q96JD6 320 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 HILPDAQ9Y5L2 63 aa10.96□□□□□ -0.65
NKX3-1-202ENST00000523261 H3BUI4 141 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 KITP10721 976 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 OTX1P32242 354 aaPredicted RBP10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 OR12D2P58182 307 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 PRKCDQ05655 676 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 NFYCQ13952 458 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 ZNF273Q14593 569 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 DLEU7Q6UYE1 221 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 ZNF695Q8IW36 515 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 CYB561A3Q8NBI2 242 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 RPL3LQ92901 407 aaKnown RBP10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 SPTSSAQ969W0 71 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 CYB5R1Q9UHQ9 305 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 LYVE1Q9Y5Y7 322 aa10.95□□□□□ -0.66
NKX3-1-202ENST00000523261 HECTD4Q9Y4D8 3996 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 SOCS2O14508 198 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 CDC42EP2O14613 210 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 SASH3O75995 380 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 PSG2P11465 335 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 MYF6P23409 242 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 OR1E2P47887 323 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 DLX6P56179 175 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 SEC23BQ15437 767 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 ZBED5Q49AG3 693 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 GPR139Q6DWJ6 353 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 CPLX4Q7Z7G2 160 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 ADCK1Q86TW2 530 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 OR6V1Q8N148 313 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 DPP10Q8N608 796 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 OR13D1Q8NGV5 346 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 OR2AJ1Q8NGZ0 328 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 BCAS4Q8TDM0 211 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 CAPSLQ8WWF8 208 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 SPSB4Q96A44 273 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 SDSLQ96GA7 329 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 SLC25A33Q9BSK2 321 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 OPA3Q9H6K4 179 aa10.94□□□□□ -0.66
NKX3-1-202ENST00000523261 C17orf98A8MV24 154 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 HCKP08631 526 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 IGHV1-8P0DP01 117 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 CD24P25063 80 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 CRABP1P29762 137 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 GNALP38405 381 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 CDKN2AP42771 156 aaKnown RBP10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 OR3A4PP47883 348 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 MRPL19P49406 292 aaKnown RBP10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 CAPZA1P52907 286 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 ST3GAL3Q11203 375 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 DRAM2Q6UX65 266 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 CCDC80Q76M96 950 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 OR4M1Q8NGD0 313 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 A4GNTQ9UNA3 340 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 B9D1Q9UPM9 204 aa10.93□□□□□ -0.66
NKX3-1-202ENST00000523261 KIAA1109Q2LD37 5005 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 OR2F2O95006 317 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 GLRA1P23415 457 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 GPR4P46093 362 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 MTPNP58546 118 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 FAM3AP98173 230 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 DYNC1I2Q13409 638 aaKnown RBP10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 DEFB136Q30KP8 78 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 C9orf152Q5JTZ5 239 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 MINOS1Q5TGZ0 78 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 AGBL2Q5U5Z8 902 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 PLBD1Q6P4A8 553 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 DNM1P34Q6PK57 102 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 SLC16A9Q7RTY1 509 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 CALHM1Q8IU99 346 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 OR2T27Q8NH04 317 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 MICU1Q9BPX6 476 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 YY1AP1Q9H869 796 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 NRIP3Q9NQ35 241 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 BAG5Q9UL15 447 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 MINOS1-NBL1R4GNA1 71 aa10.92□□□□□ -0.66
NKX3-1-202ENST00000523261 XRCC2O43543 280 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 SNNO75324 88 aaPredicted RBP10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 PTP4A3O75365 173 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 SLC2A1P11166 492 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 DCTDP32321 178 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 ZNF260Q3ZCT1 412 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 SLC36A3Q495N2 470 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms