RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CDH26Q8IXH8 852 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 OR5AS1Q8N127 324 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 FAM222BQ8WU58 562 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 AP3S1Q92572 193 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 CPNE2Q96FN4 548 aaPredicted RBP11.2□□□□□ -0.62
CPNE3-205ENST00000522240 PLPPR2Q96GM1 343 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
CPNE3-205ENST00000522240 MRPL15Q9P015 296 aaKnown RBP11.2□□□□□ -0.62
CPNE3-205ENST00000522240 A3GALT2U3KPV4 340 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 V9GY05 133 aa11.2□□□□□ -0.62
CPNE3-205ENST00000522240 IGLV3-9A0A075B6K5 115 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 ANKRD30BLA7E2S9 258 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 AIPO00170 330 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 GMDSO60547 372 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 NRASP01111 189 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 MAS1P04201 325 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 CD3EP07766 207 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 CD37P11049 281 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 ATF1P18846 271 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 MPV17P39210 176 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 RANBP1P43487 201 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 KIR2DL3P43628 341 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 OR10A3P58181 314 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 PSG7Q13046 419 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 DYNC1I2Q13409 638 aaKnown RBP11.19□□□□□ -0.62
CPNE3-205ENST00000522240 DDI2Q5TDH0 399 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 GLT8D1Q68CQ7 371 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 OR2T2Q6IF00 324 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 SLC22A25Q6T423 547 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 DMRTC2Q8IXT2 367 aaPredicted RBP11.19□□□□□ -0.62
CPNE3-205ENST00000522240 ACBD4Q8NC06 268 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 DNAAF1Q8NEP3 725 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 OR51A2Q8NGJ7 313 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 TMEM171Q8WVE6 324 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 FOXRED1Q96CU9 486 aaPredicted RBP11.19□□□□□ -0.62
CPNE3-205ENST00000522240 CMBLQ96DG6 245 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 GFI1Q99684 422 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 PAPOLGQ9BWT3 736 aaKnown RBP11.19□□□□□ -0.62
CPNE3-205ENST00000522240 BARHL1Q9BZE3 327 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 NXF2Q9GZY0 626 aaKnown RBP11.19□□□□□ -0.62
CPNE3-205ENST00000522240 SLC22A4Q9H015 551 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 TPK1Q9H3S4 243 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 METTL17Q9H7H0 456 aaPredicted RBP11.19□□□□□ -0.62
CPNE3-205ENST00000522240 CGGBP1Q9UFW8 167 aaPredicted RBP11.19□□□□□ -0.62
CPNE3-205ENST00000522240 PURGQ9UJV8 347 aaKnown RBP11.19□□□□□ -0.62
CPNE3-205ENST00000522240 AK6Q9Y3D8 172 aaKnown RBP11.19□□□□□ -0.62
CPNE3-205ENST00000522240 RNF115Q9Y4L5 304 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 MPC1Q9Y5U8 109 aa11.19□□□□□ -0.62
CPNE3-205ENST00000522240 A0A075B6Q4 140 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 IGKV1-9A0A0C4DH69 117 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 A6NIN4 97 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 IFITM5A6NNB3 132 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 DEFB108AA8MXU0 73 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 SHISA9B4DS77 424 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 MAGEB3O15480 346 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 PRKACBP22694 351 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 AZGP1P25311 298 aaKnown RBP11.18□□□□□ -0.62
CPNE3-205ENST00000522240 LOXP28300 417 aaPredicted RBP11.18□□□□□ -0.62
CPNE3-205ENST00000522240 KLF3P57682 345 aaPredicted RBP11.18□□□□□ -0.62
CPNE3-205ENST00000522240 PRDX4Q13162 271 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 SNTB1Q13884 538 aaKnown RBP11.18□□□□□ -0.62
CPNE3-205ENST00000522240 UBE2V2Q15819 145 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 ZNF404Q494X3 552 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 ADAM5Q6NVV9 412 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 LYPD6Q86Y78 171 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 ZDHHC23Q8IYP9 409 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 SYNPRQ8TBG9 265 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 SSC4DQ8WTU2 575 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 MRPL24Q96A35 216 aaKnown RBP11.18□□□□□ -0.62
CPNE3-205ENST00000522240 SLC30A2Q9BRI3 323 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 UQCC2Q9BRT2 126 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 TMEM204Q9BSN7 226 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 MRI1Q9BV20 369 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 GPR173Q9NS66 373 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 CA10Q9NS85 328 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 CRIM1Q9NZV1 1036 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 PLEKHB1Q9UF11 243 aaPredicted RBP11.18□□□□□ -0.62
CPNE3-205ENST00000522240 NOP16Q9Y3C1 178 aaKnown RBP11.18□□□□□ -0.62
CPNE3-205ENST00000522240 RHBDD3Q9Y3P4 386 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 CMAHPQ9Y471 501 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 ABCA12Q86UK0 2595 aa11.18□□□□□ -0.62
CPNE3-205ENST00000522240 LRBAP50851 2863 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 A0A1B0GWJ7 208 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 SMIM30A4D0T7 59 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 C19orf84I3L1E1 186 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 SLC17A2O00624 439 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 TIMM8AO60220 97 aaPredicted RBP11.17□□□□□ -0.62
CPNE3-205ENST00000522240 NCR1O76036 304 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 IGHV3-13P01766 116 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 HCKP08631 526 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 OCMP0CE72 109 aaPredicted RBP11.17□□□□□ -0.62
CPNE3-205ENST00000522240 CAPZA1P52907 286 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 CAV3P56539 151 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 SCAND1P57086 179 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 SELENOVP59797 346 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 MSMPQ1L6U9 139 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 TMEM255AQ5JRV8 349 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 C1orf100Q5SVJ3 147 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 PLCXD3Q63HM9 321 aa11.17□□□□□ -0.62
CPNE3-205ENST00000522240 LINC00299Q6ZSB3 139 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms