RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 LRCH1Q9Y2L9 728 aa17.26■□□□□ 0.35
TRIM35-203ENST00000521253 POLR3KQ9Y2Y1 108 aaPredicted RBP17.26■□□□□ 0.35
TRIM35-203ENST00000521253 WNK2Q9Y3S1 2297 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 PPIAL4CA0A0B4J2A2 164 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 TRAPPC2LH3BP13 241 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 J3QLI3 93 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 J3QRE1 110 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 DLGAP1O14490 977 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 LHBP01229 141 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 EGR1P18146 543 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 RIPPLY1Q0D2K3 151 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 RCN1Q15293 331 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 LYPD2Q6UXB3 125 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 WDR82Q6UXN9 313 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 RHOXF1Q8NHV9 184 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 RORBQ92753 470 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 ITFG2Q969R8 447 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 NEIL1Q96FI4 390 aaPredicted RBP17.25■□□□□ 0.35
TRIM35-203ENST00000521253 RNF170Q96K19 258 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 SSBP3Q9BWW4 388 aaPredicted RBP17.25■□□□□ 0.35
TRIM35-203ENST00000521253 TLNRD1Q9H1K6 362 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 SMPD3Q9NY59 655 aaPredicted RBP17.25■□□□□ 0.35
TRIM35-203ENST00000521253 PIGLQ9Y2B2 252 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 ARHGAP32A7KAX9 2087 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 COL6A5A8TX70 2615 aa17.25■□□□□ 0.35
TRIM35-203ENST00000521253 LOC105371242A0A075B767 164 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 A0A1B0GTI1 187 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 OOEPA6NGQ2 149 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 SNTNA6NMZ2 147 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 P2RY10O00398 339 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 CDIPTO14735 213 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 SLC16A6O15403 523 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 MTRF1O75570 445 aaKnown RBP17.24■□□□□ 0.35
TRIM35-203ENST00000521253 DHRS3O75911 302 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 FAHP16930 419 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 LRRC36Q1X8D7 754 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 KCTD8Q6ZWB6 473 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 NLRC3Q7RTR2 1065 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 THAP5Q7Z6K1 395 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 CATSPERDQ86XM0 798 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 OR8B3Q8NGG8 313 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 LRRC29Q8WV35 223 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 RDH12Q96NR8 316 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 OR8B2Q96RD0 313 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 C7orf69Q9H7B7 122 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 RNPEPL1Q9HAU8 725 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 DNHD1Q96M86 4753 aa17.24■□□□□ 0.35
TRIM35-203ENST00000521253 TRAV38-1A0A0B4J264 116 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 TMEM210A6NLX4 147 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 MPZL2O60487 215 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 PSMB10P40306 273 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 PITPNBP48739 271 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 ISL1P61371 349 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 GNB2P62879 340 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 ACTC1P68032 377 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 ACTA1P68133 377 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 ZNF91Q05481 1191 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 KCNJ8Q15842 424 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 TP53I3Q53FA7 332 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 FAM76BQ5HYJ3 339 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 DMRTC1Q5HYR2 192 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 CEP78Q5JTW2 689 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 ZBTB37Q5TC79 503 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 LPCAT4Q643R3 524 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 RPL3LQ92901 407 aaKnown RBP17.23■□□□□ 0.35
TRIM35-203ENST00000521253 LGALS12Q96DT0 336 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 HIST1H2AAQ96QV6 131 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 ACOXLQ9NUZ1 547 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 OR5V1Q9UGF6 321 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 OPN4Q9UHM6 478 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 ENPP5Q9UJA9 477 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 GNG8Q9UK08 70 aa17.23■□□□□ 0.35
TRIM35-203ENST00000521253 EXOGQ9Y2C4 368 aaKnown RBP17.23■□□□□ 0.35
TRIM35-203ENST00000521253 DAPL1A0PJW8 107 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 TNFRSF13BO14836 293 aaPredicted RBP17.22■□□□□ 0.35
TRIM35-203ENST00000521253 ADRA2CP18825 462 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 PEX2P28328 305 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 GPM6AP51674 278 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 ODF4Q2M2E3 257 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 CEACAM21Q3KPI0 293 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 TEX36Q5VZQ5 186 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 FAM220AQ7Z4H9 259 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 FAM90A1Q86YD7 464 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 OR14K1Q8NGZ2 314 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 RNF166Q96A37 237 aaPredicted RBP17.22■□□□□ 0.35
TRIM35-203ENST00000521253 Q96MT0 163 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 MDFIQ99750 246 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 AMBNQ9NP70 447 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 TRIM36Q9NQ86 728 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 CTSZQ9UBR2 303 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 CLN8Q9UBY8 286 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 V9GYS6 101 aa17.22■□□□□ 0.35
TRIM35-203ENST00000521253 IGHV3OR15-7A0A075B7D8 119 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.21■□□□□ 0.35
TRIM35-203ENST00000521253 GYPAP02724 150 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 DBTP11182 482 aaKnown RBP17.21■□□□□ 0.35
TRIM35-203ENST00000521253 ZNF12P17014 697 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 CCL1P22362 96 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 CFHR2P36980 270 aa17.21■□□□□ 0.35
TRIM35-203ENST00000521253 PAX2Q02962 417 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms