RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 OR1F12Q8NHA8 337 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 NDNFQ8TB73 568 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 LRRC8CQ8TDW0 803 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 PYROXD1Q8WU10 500 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 APOBEC3DQ96AK3 386 aaPredicted RBP5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 DGCR6LQ9BY27 220 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 DNTTIP1Q9H147 329 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 USE1Q9NZ43 259 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 MINOS1-NBL1R4GNA1 71 aa5.04□□□□□ -1.6
CTNNA1-216ENST00000519489 IGLV2-18A0A075B6J9 118 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 A0A0B4J2E0 115 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 A0A1B0GX12 115 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 A0A1W2PPL8 197 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A18PA6NE21 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A16PA6NEW6 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A20PA6NIJ5 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A9PA6NNJ1 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A12PA8MX19 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A5PA8MXJ8 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 IGLL5B9A064 214 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 CDIPTO14735 213 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 RER1O15258 196 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 GMDSO60547 372 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 MMP23AO75900 390 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 RGS11O94810 467 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 TPM3P06753 285 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 ASAH2BP0C7U1 165 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A15PP0C7V4 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A13PP0C7W8 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A14PP0C7W9 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FAM90A24PP0C7X0 464 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 CTLA4P16410 223 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 MSR1P21757 451 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 SDHAP31040 664 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 MDH1P40925 334 aaKnown RBP5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 SERPINB8P50452 374 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 CDH12P55289 794 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 RPL31P62899 125 aaKnown RBP5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 TPM4P67936 248 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FGD3Q5JSP0 725 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 ZDHHC21Q8IVQ6 265 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 OR1M1Q8NGA1 313 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 OR5L1Q8NGL2 311 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 OR13D1Q8NGV5 346 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 MOSPD2Q8NHP6 518 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 STMN2Q93045 179 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 L3HYPDHQ96EM0 354 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 MED30Q96HR3 178 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 OR4C12Q96R67 309 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 ERP44Q9BS26 406 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 C1orf50Q9BV19 199 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 FGF23Q9GZV9 251 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 SRD5A3Q9H8P0 318 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 SP140LQ9H930 580 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 KRCC1Q9NPI7 259 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 TMEM216Q9P0N5 145 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 MARCOQ9UEW3 520 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 SLC13A4Q9UKG4 626 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 AURKCQ9UQB9 309 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 DNAH8Q96JB1 4490 aa5.03□□□□□ -1.6
CTNNA1-216ENST00000519489 IGHV2-26A0A0B4J1V2 119 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 A0A1W2PPI3 338 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 C12orf71A8MTZ7 269 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 CENPBD1B2RD01 187 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 M0QZK8 103 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 M0R3H8 397 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 AKR7A2O43488 359 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 OR6A2O95222 327 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 CPSF4O95639 269 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 MT-ATP6P00846 226 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 SMR3BP02814 79 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 NR2F1P10589 423 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 PSG2P11465 335 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 PIPP12273 146 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 OTX1P32242 354 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 ASIPP42127 132 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 GPR12P47775 334 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 GABRA2P47869 451 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 ISL1P61371 349 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 ACTA2P62736 377 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 ACTG2P63267 376 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 ACTC1P68032 377 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 ACTA1P68133 377 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 SPIBQ01892 262 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 ZNF92Q03936 586 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 RPL18Q07020 188 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 CD47Q08722 323 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 PGS1Q32NB8 556 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 LCN8Q6JVE9 175 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 SMARCD3Q6STE5 483 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 TMPRSS11FQ6ZWK6 438 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 SPATA12Q7Z6I5 190 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 LRRC34Q8IZ02 419 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 POM121L12Q8N7R1 296 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 C2CD4CQ8TF44 421 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 SPRYD4Q8WW59 207 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 RGP1Q92546 391 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 UBE2E2Q96LR5 201 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 EPYCQ99645 322 aa5.02□□□□□ -1.61
CTNNA1-216ENST00000519489 TRIM31Q9BZY9 425 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms