RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 FLI1Q01543 452 aaPredicted RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 C6orf99Q4VX62 202 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 TMEM236Q5W0B7 351 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 STEAP4Q687X5 459 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 ULK3Q6PHR2 472 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 LINC00336Q6ZUF6 198 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 CALHM3Q86XJ0 350 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 SLC30A8Q8IWU4 369 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 WDR31Q8NA23 367 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 PROKR2Q8NFJ6 384 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 OR2Z1Q8NG97 314 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 OR4M2Q8NGB6 313 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 SFXN5Q8TD22 340 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 PHF10Q8WUB8 498 aaKnown RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 CPNE4Q96A23 557 aaPredicted RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 WDR34Q96EX3 536 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 RHOXF2Q9BQY4 288 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 IL22Q9GZX6 179 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 FANCEQ9HB96 536 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 HEBP1Q9NRV9 189 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 RBFOX1Q9NWB1 397 aaKnown RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 ADA2Q9NZK5 511 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 CES1P1Q9UKY3 287 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 FARSAQ9Y285 508 aaKnown RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 SIGLEC7Q9Y286 467 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 ISPDA4D126 451 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 ZNF701M0R085 212 aaPredicted RBP2.3□□□□□ -2.04
SQLE-202ENST00000518604 SLC19A2O60779 497 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 SCELO95171 688 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 TTC4O95801 387 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 PPP1CAP62136 330 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 INCA1Q0VD86 236 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 BTN1A1Q13410 526 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 LUZP6Q538Z0 58 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 KLHL12Q53G59 568 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 TTC19Q6DKK2 380 aaPredicted RBP2.3□□□□□ -2.04
SQLE-202ENST00000518604 MED27Q6P2C8 311 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 DEGS2Q6QHC5 323 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 C16orf47Q6ZP98 133 aaPredicted RBP2.3□□□□□ -2.04
SQLE-202ENST00000518604 SLC25A29Q8N8R3 303 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 OR5M1Q8NGP8 315 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 PIH1D2Q8WWB5 315 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 GPR82Q96P67 336 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 NAA50Q9GZZ1 169 aaKnown RBP2.3□□□□□ -2.04
SQLE-202ENST00000518604 RGCCQ9H4X1 137 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 PRSS16Q9NQE7 514 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 DYRK4Q9NR20 520 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 DDX18Q9NVP1 670 aaKnown RBP2.3□□□□□ -2.04
SQLE-202ENST00000518604 RABL2AQ9UBK7 228 aaPredicted RBP2.3□□□□□ -2.04
SQLE-202ENST00000518604 OR51B2Q9Y5P1 312 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 DOCK8Q8NF50 2099 aa2.3□□□□□ -2.04
SQLE-202ENST00000518604 SBNO1A3KN83 1393 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 GOLGA6L7A0A1B0GV03 622 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 CEACAM18A8MTB9 384 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 C16orf90A8MZG2 172 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 PRAMEF26H0Y7S4 382 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 MAS1P04201 325 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 MPIP34949 423 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 PRSS3P35030 304 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 ARL2P36404 184 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 GDI2P50395 445 aaKnown RBP2.29□□□□□ -2.04
SQLE-202ENST00000518604 ATP6V0D1P61421 351 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 C2orf54Q08AI8 447 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 TRDNQ13061 729 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 ORMDL3Q8N138 153 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 RNF10Q8N5U6 811 aaKnown RBP2.29□□□□□ -2.04
SQLE-202ENST00000518604 TRAM1L1Q8N609 369 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 SLC26A10Q8NG04 563 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 OR52N1Q8NH53 320 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 CERS2Q96G23 380 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 UBE2E2Q96LR5 201 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 ZFP3Q96NJ6 502 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 ALS2CR12Q96Q35 445 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 NAPGQ99747 312 aaPredicted RBP2.29□□□□□ -2.04
SQLE-202ENST00000518604 ANP32EQ9BTT0 268 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 FBXO8Q9NRD0 319 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 RHBDD3Q9Y3P4 386 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 GPR179Q6PRD1 2367 aa2.29□□□□□ -2.04
SQLE-202ENST00000518604 CCL15-CCL14A0A0B4J2E2 113 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 MFNGO00587 321 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 CCDC22O60826 627 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 MMP7P09237 267 aaPredicted RBP2.28□□□□□ -2.04
SQLE-202ENST00000518604 SLC35G6P0C7Q6 338 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 PMCHP20382 165 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 PEX19P40855 299 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 CMC4P56277 68 aaPredicted RBP2.28□□□□□ -2.04
SQLE-202ENST00000518604 KRTAP10-1P60331 282 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 CCL15Q16663 113 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 HIKESHIQ53FT3 197 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 ZFAND6Q6FIF0 208 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 SLC35D2Q76EJ3 337 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 OR2W3Q7Z3T1 314 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 SLC7A5P1Q8MH63 180 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 STK40Q8N2I9 435 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 LINC00469Q8N7U9 141 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 FAM184AQ8NB25 1140 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 TMEM104Q8NE00 496 aa2.28□□□□□ -2.04
SQLE-202ENST00000518604 RXFP2Q8WXD0 754 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms