RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 IFI44Q8TCB0 444 aa11.98□□□□□ -0.49
TCOF1-214ENST00000515035 A4GNTQ9UNA3 340 aa11.98□□□□□ -0.49
TCOF1-214ENST00000515035 IGHV3-64DA0A0J9YX35 117 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 TNFRSF10CO14798 259 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 RRADP55042 308 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 OR8G1Q15617 311 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 DMRTC1Q5HYR2 192 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 GPR137Q96N19 417 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 C12orf49Q9H741 205 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 FGF22Q9HCT0 170 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 B9D1Q9UPM9 204 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 PCMT1P22061 227 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 ABCD3P28288 659 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 ZNF154Q13106 437 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 CEBPEQ15744 281 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 KIRREL2Q6UWL6 708 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 NTNG2Q96CW9 530 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 TEX101Q9BY14 249 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 COMMD5Q9GZQ3 224 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 NGBQ9NPG2 151 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 DNAJC13O75165 2243 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 KIAA1324LA8MWY0 1029 aaPredicted RBP11.97□□□□□ -0.49
TCOF1-214ENST00000515035 ONECUT2O95948 504 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 CD96P40200 585 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 PPICP45877 212 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 ZNF718Q3SXZ3 478 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 RNASEKQ6P5S7 137 aaKnown RBP11.97□□□□□ -0.49
TCOF1-214ENST00000515035 CA5BP1Q8WTZ4 195 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 NDFIP1Q9BT67 221 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 TEX50A0A1B0GTY4 177 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 PRR35P0CG20 571 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 NKAIN2Q5VXU1 208 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 LHFPL5Q8TAF8 219 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 ANKRD10Q9NXR5 420 aa11.97□□□□□ -0.49
TCOF1-214ENST00000515035 A0A1B0GX78 115 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 PLPP2O43688 288 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 ARG1P05089 322 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 SCGB1C2P0DMR2 95 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 SLC6A1P30531 599 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 AGFG1P52594 562 aaKnown RBP11.96□□□□□ -0.49
TCOF1-214ENST00000515035 IL10RAQ13651 578 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 VWA1Q6PCB0 445 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 SEZ6L2Q6UXD5 910 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 ZNF573Q86YE8 665 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 SLC37A2Q8TED4 501 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 SLC17A5Q9NRA2 495 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 ELOA3CA0A087WX78 387 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-214ENST00000515035 ZNF98A6NK75 572 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 LY86O95711 162 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 LGALS4P56470 323 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 ERHP84090 104 aaKnown RBP11.96□□□□□ -0.49
TCOF1-214ENST00000515035 AWAT1Q58HT5 328 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 OSR2Q8N2R0 312 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 ISOC2Q96AB3 205 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 CNRIP1Q96F85 164 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-214ENST00000515035 MED19A0JLT2 244 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-214ENST00000515035 SEMG1P04279 462 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 LSRQ86X29 649 aaPredicted RBP11.96□□□□□ -0.49
TCOF1-214ENST00000515035 C16orf52Q8NHV5 167 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 OR8B4Q96RC9 309 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 ABHD1Q96SE0 405 aa11.96□□□□□ -0.49
TCOF1-214ENST00000515035 LRRC30A6NM36 301 aa11.96□□□□□ -0.5
TCOF1-214ENST00000515035 NRG2O14511 850 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-214ENST00000515035 ZNF749O43361 778 aa11.96□□□□□ -0.5
TCOF1-214ENST00000515035 EMDP50402 254 aa11.96□□□□□ -0.5
TCOF1-214ENST00000515035 ZNF121P58317 390 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-214ENST00000515035 PAX5Q02548 391 aa11.96□□□□□ -0.5
TCOF1-214ENST00000515035 OR5I1Q13606 314 aa11.96□□□□□ -0.5
TCOF1-214ENST00000515035 DHRS7BQ6IAN0 325 aaPredicted RBP11.96□□□□□ -0.5
TCOF1-214ENST00000515035 LINC00696Q6ZRV3 163 aa11.96□□□□□ -0.5
TCOF1-214ENST00000515035 PELI1Q96FA3 418 aa11.96□□□□□ -0.5
TCOF1-214ENST00000515035 PDFQ9HBH1 243 aa11.96□□□□□ -0.5
TCOF1-214ENST00000515035 TPRP12270 2363 aaKnown RBP11.96□□□□□ -0.5
TCOF1-214ENST00000515035 FCN1O00602 326 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 SPINK4O60575 86 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 SFT2D2O95562 160 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 FBP1P09467 338 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 SULT1A3P0DMM9 295 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 SULT1A4P0DMN0 295 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 GABRA1P14867 456 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 SELENOPP49908 381 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 ZNF628Q5EBL2 1059 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 RSPO2Q6UXX9 243 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-214ENST00000515035 MBNL1Q9NR56 388 aaKnown RBP11.95□□□□□ -0.5
TCOF1-214ENST00000515035 TBC1D29Q9UFV1 150 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 TMED3Q9Y3Q3 217 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 LOC102724200A0A096LPH7 203 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-214ENST00000515035 C9orf170A2RU37 121 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 MAP1LC3B2A6NCE7 125 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 TOX3O15405 576 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-214ENST00000515035 ICOSLGO75144 302 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 C9orf50Q5SZB4 431 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 PRSS54Q6PEW0 395 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 TSEN54Q7Z6J9 526 aaKnown RBP11.95□□□□□ -0.5
TCOF1-214ENST00000515035 STPG2Q8N412 459 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 C9orf62Q8N4C0 152 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 OR5C1Q8NGR4 320 aa11.95□□□□□ -0.5
TCOF1-214ENST00000515035 BCL7CQ8WUZ0 217 aaPredicted RBP11.95□□□□□ -0.5
TCOF1-214ENST00000515035 TRIB1Q96RU8 372 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms