RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TOX4O94842 621 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 ECDO95905 644 aaPredicted RBP8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 IGLV3-1P01715 115 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DUX4L2P0CJ85 424 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DUX4L3P0CJ86 424 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DUX4L4P0CJ87 422 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DUX4L5P0CJ88 424 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DUX4L6P0CJ89 424 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DUX4L7P0CJ90 424 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DCTDP32321 178 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 HCCSP53701 268 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 ELF3P78545 371 aaPredicted RBP8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 ROM1Q03395 351 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 POU4F2Q12837 409 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 PTGES3Q15185 160 aaKnown RBP8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DEFB112Q30KQ8 113 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 FAM76BQ5HYJ3 339 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 METTL11BQ5VVY1 283 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 RUSC1-AS1Q66K80 236 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 STUMQ69YW2 141 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 KCTD18Q6PI47 426 aaPredicted RBP8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DUX4L9Q6RFH8 374 aaPredicted RBP8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 BTN2A1Q7KYR7 527 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 KRT77Q7Z794 578 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 ZDHHC23Q8IYP9 409 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 FGFRL1Q8N441 504 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 OR10Z1Q8NGY1 313 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 ASB17Q8WXJ9 295 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 ST8SIA4Q92187 359 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 WDFY2Q96P53 400 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 PKP2Q99959 881 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 PCGF1Q9BSM1 259 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 PRRG3Q9BZD7 231 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 GABARAPL1Q9H0R8 117 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 RASSF4Q9H2L5 321 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 KRT84Q9NSB2 600 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 DUX4Q9UBX2 424 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 RPUSD1Q9UJJ7 312 aaKnown RBP8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 COPS3Q9UNS2 423 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 CENPVL3A0A0U1RRI6 287 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 ZNF816-ZNF321PA0A0X1KG74 233 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 TMEM269A0A1B0GVZ9 245 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 ZAR1LA6NP61 321 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 M0R129 80 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 HOXA3O43365 443 aaPredicted RBP8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 MITFO75030 526 aaPredicted RBP8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 ZNF254O75437 659 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 EFNB1P98172 346 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 PDCD1Q15116 288 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 ZNF829Q3KNS6 432 aaPredicted RBP8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 ATPAF1Q5TC12 328 aaPredicted RBP8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 AADACL4Q5VUY2 407 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 SLX4IPQ5VYV7 408 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 C12orf73Q69YU5 71 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 KDM4DQ6B0I6 523 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 SLC36A1Q7Z2H8 476 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 ZNF679Q8IYX0 411 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 FAM216BQ8N7L0 139 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 SCCPDHQ8NBX0 429 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 LY6G5BQ8NDX9 201 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 PIGCQ92535 297 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 RPL3LQ92901 407 aaKnown RBP8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 ITFG2Q969R8 447 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 SEH1LQ96EE3 360 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 DUS3LQ96G46 650 aaKnown RBP8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 RAB3IPQ96QF0 476 aaPredicted RBP8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 OR8B4Q96RC9 309 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 CNN2Q99439 309 aaKnown RBP8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 CCL13Q99616 98 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 ZNF747Q9BV97 191 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 MROQ9BYG7 248 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 DNTTIP1Q9H147 329 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 NUFIP1Q9UHK0 495 aaKnown RBP8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 TMEM14AQ9Y6G1 99 aa8.64□□□□□ -1.03
HMGXB3-205ENST00000514469 SLC22A31A6NKX4 558 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 G3V2T6 193 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 PSMD9O00233 223 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 GPR37O15354 613 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 SRSF10O75494 262 aaKnown RBP8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 ATP6V1B1P15313 513 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 AMY2BP19961 511 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 EPHA2P29317 976 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 MAP2K3P46734 347 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 TGM4P49221 684 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 RASSF2P50749 326 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 GPM6AP51674 278 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 IL13RA1P78552 427 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 MFGE8Q08431 387 aaPredicted RBP8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 CEACAM21Q3KPI0 293 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 ZBTB37Q5TC79 503 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 NXNL2Q5VZ03 156 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 Q6YL49 198 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 MEPCEQ7L2J0 689 aaKnown RBP8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 BCDIN3DQ7Z5W3 292 aaKnown RBP8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 TMEM86BQ8N661 226 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 KIR3DL3Q8N743 410 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 SGMS2Q8NHU3 365 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 C8orf46Q8TAG6 207 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 FAM81AQ8TBF8 368 aa8.63□□□□□ -1.03
HMGXB3-205ENST00000514469 TMEM163Q8TC26 289 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms