RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 SPTSSAQ969W0 71 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 NOTCH4Q99466 2003 aa13.25□□□□□ -0.29
USP38-202ENST00000510377 JTBO76095 146 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 ABHD16AO95870 558 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 CD37P11049 281 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 MUC1P15941 1255 aaPredicted RBP13.24□□□□□ -0.29
USP38-202ENST00000510377 SMAD4Q13485 552 aaKnown RBP13.24□□□□□ -0.29
USP38-202ENST00000510377 C6orf201Q7Z4U5 140 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 MAGT1Q9H0U3 335 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 PCOLCE2Q9UKZ9 415 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 hCG_1809904A0A1W2PP81 198 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 A0A1W2PR64 198 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 A0A1W2PRV1 198 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 BDP1A6H8Y1 2624 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 H7C1Q1 480 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 OR5H8P0DN80 308 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 RFC3P40938 356 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 TSPO2Q5TGU0 170 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 EMG1Q92979 244 aaKnown RBP13.24□□□□□ -0.29
USP38-202ENST00000510377 GPX7Q96SL4 187 aaPredicted RBP13.24□□□□□ -0.29
USP38-202ENST00000510377 PTAFRP25105 342 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 PNLIPRP2P54317 469 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 PIGPP57054 158 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 LY6G6FQ5SQ64 297 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 PRSS54Q6PEW0 395 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 ARRDC1Q8N5I2 433 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 SLC30A7Q8NEW0 376 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 SLC26A10Q8NG04 563 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 MR1Q95460 341 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 A6NLC8 198 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 ALG1L2C9J202 215 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 G3V3Q6 166 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 RAB27BO00194 218 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 EFSO43281 561 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 GSTP1P09211 210 aaKnown RBP13.24□□□□□ -0.29
USP38-202ENST00000510377 RPS4XP62701 263 aaKnown RBP13.24□□□□□ -0.29
USP38-202ENST00000510377 MOB3CQ70IA8 216 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 MED9Q9NWA0 146 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 LPAR3Q9UBY5 353 aa13.24□□□□□ -0.29
USP38-202ENST00000510377 NKX6-1P78426 367 aaPredicted RBP13.23□□□□□ -0.29
USP38-202ENST00000510377 IL34Q6ZMJ4 242 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 DOK3Q7L591 496 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 SEMA6DQ8NFY4 1073 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 SCGB1C1Q8TD33 95 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 REEP6Q96HR9 211 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 METTL9Q9H1A3 318 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 RARRES3Q9UL19 164 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 SPRY1O43609 319 aaPredicted RBP13.23□□□□□ -0.29
USP38-202ENST00000510377 SLC25A4P12235 298 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 TAGLN2P37802 199 aaKnown RBP13.23□□□□□ -0.29
USP38-202ENST00000510377 PLAURQ03405 335 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 RPUSD3Q6P087 351 aaKnown RBP13.23□□□□□ -0.29
USP38-202ENST00000510377 CLCC1Q96S66 551 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 VN1R1Q9GZP7 353 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 OR51B6Q9H340 312 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 A0A1W2PPH5 198 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 DDAH2O95865 285 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 ACTL6AO96019 429 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 IFNA5P01569 189 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 FABP1P07148 127 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 TBPP20226 339 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 ZNF345Q14585 488 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 TCEAL6Q6IPX3 200 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 C5orf46Q6UWT4 87 aa13.23□□□□□ -0.29
USP38-202ENST00000510377 A0A1B0GX78 115 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 MSGN1A6NI15 193 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 OR2C1O95371 312 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 APOBEC1P41238 236 aaKnown RBP13.22□□□□□ -0.29
USP38-202ENST00000510377 PTGFRP43088 359 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 RNF4P78317 190 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 MYBPHQ13203 477 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 OPN5Q6U736 354 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 ZFP62Q8NB50 900 aaPredicted RBP13.22□□□□□ -0.29
USP38-202ENST00000510377 OR2G3Q8NGZ4 309 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 PRRX2Q99811 253 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 TCEAL7Q9BRU2 100 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 ANKRD10Q9NXR5 420 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 LRFN1Q9P244 771 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 C19orf25Q9UFG5 118 aaPredicted RBP13.22□□□□□ -0.29
USP38-202ENST00000510377 KCNS2Q9ULS6 477 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 RNF222A6NCQ9 220 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 CDC14BO60729 498 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 TMEM33P57088 247 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 SRSF3P84103 164 aaKnown RBP13.22□□□□□ -0.29
USP38-202ENST00000510377 DHODHQ02127 395 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 TGIF1Q15583 401 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 GUK1Q16774 197 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 GPR137CQ8N3F9 429 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 CCDC71LQ8N9Z2 235 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 ZFAND5O76080 213 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 FCARP24071 287 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 PLCXD3Q63HM9 321 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 ZSCAN4Q8NAM6 433 aaPredicted RBP13.22□□□□□ -0.29
USP38-202ENST00000510377 SLC38A9Q8NBW4 561 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 GLYATL2Q8WU03 294 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 RTN4IP1Q8WWV3 396 aaPredicted RBP13.22□□□□□ -0.29
USP38-202ENST00000510377 IL1F10Q8WWZ1 152 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 SGCZQ96LD1 299 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 DMRTA2Q96SC8 542 aa13.22□□□□□ -0.29
USP38-202ENST00000510377 NRIP2Q9BQI9 281 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms