RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 LAMP5Q9UJQ1 280 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 FBXL7Q9UJT9 491 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 PCDHGB5Q9Y5G0 923 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 LOC100130705A0A1B0GUX0 176 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 PLSCR5A0PG75 271 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 E9PI62 339 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 TMEM178BH3BS89 294 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 H3BSH0 61 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF561-AS1K7EIQ3 104 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 PPIHO43447 177 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 XRCC2O43543 280 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 LALBAP00709 142 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 MT-ND5P03915 603 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 CCL1P22362 96 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 TUBG1P23258 451 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 ZFP36P26651 326 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 HSD11B1P28845 292 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 DCTDP32321 178 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 AQP4P55087 323 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 PAX2Q02962 417 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF154Q13106 437 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 CDONQ4KMG0 1287 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 LIPNQ5VXI9 398 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 LYPD2Q6UXB3 125 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 ZBTB49Q6ZSB9 765 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 RHOUQ7L0Q8 258 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 CATSPERDQ86XM0 798 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF679Q8IYX0 411 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 OR10H4Q8NGA5 316 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 OR52I1Q8NGK6 324 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 OR51E1Q8TCB6 317 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 Q8TCH9 128 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 PGAM5Q96HS1 289 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 TLNRD1Q9H1K6 362 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 NIPAL2Q9H841 368 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 ISG20L2Q9H9L3 353 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 LPAR2Q9HBW0 351 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 GPR84Q9NQS5 396 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 TUBG2Q9NRH3 451 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 MRPL15Q9P015 296 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 H2AFY2Q9P0M6 372 aaPredicted RBP6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 WARS2Q9UGM6 360 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 ZDHHC8Q9ULC8 765 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 EXOGQ9Y2C4 368 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 GMPPBQ9Y5P6 360 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 R4GMQ9 66 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 U3KQE9 123 aa6.03□□□□□ -1.44
TOPBP1-207ENST00000509162 ATRQ13535 2644 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 A0A0U1RQV5 110 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 CEACAM18A8MTB9 384 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 CLDN25C9JDP6 229 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 P2RY10O00398 339 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 TNFRSF13BO14836 293 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 FSHBP01225 129 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 LIMS3P0CW19 117 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 LIMS4P0CW20 117 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 SELLP14151 372 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 FAHP16930 419 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 MTNR1AP48039 350 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 GP2P55259 537 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 OR12D2P58182 307 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 CDC42P60953 191 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 SRSF2Q01130 221 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 TAF13Q15543 124 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 TIGD6Q17RP2 521 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 TMEM42Q69YG0 159 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 DEGS2Q6QHC5 323 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 ARL9Q6T311 187 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 THAP5Q7Z6K1 395 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 KRT77Q7Z794 578 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 C1orf174Q8IYL3 243 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 GCSAMQ8N6F7 178 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 ZNF485Q8NCK3 441 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 OR51A4Q8NGJ6 313 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 OR14K1Q8NGZ2 314 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 RPS4Y2Q8TD47 263 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 CCL17Q92583 94 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 STMN2Q93045 179 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 PELI1Q96FA3 418 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 FAM71F1Q96KD3 344 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 COG8Q96MW5 612 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 ADI1Q9BV57 179 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 PRRG3Q9BZD7 231 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 ZNF665Q9H7R5 613 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 RNPEPL1Q9HAU8 725 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 SMURF1Q9HCE7 757 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 CYSLTR2Q9NS75 346 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 UFSP2Q9NUQ7 469 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 MRPS18AQ9NVS2 196 aaKnown RBP6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 PAK1IP1Q9NWT1 392 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 IL19Q9UHD0 177 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 OPN4Q9UHM6 478 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 FBXO9Q9UK97 447 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 IKZF2Q9UKS7 526 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 NPTNQ9Y639 398 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 SIRT4Q9Y6E7 314 aaPredicted RBP6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 V9GYS6 101 aa6.02□□□□□ -1.45
TOPBP1-207ENST00000509162 IGKV1-27A0A075B6S5 117 aa6.01□□□□□ -1.45
TOPBP1-207ENST00000509162 IGHV3OR15-7A0A075B7D8 119 aa6.01□□□□□ -1.45
TOPBP1-207ENST00000509162 TMEM269A0A1B0GVZ9 245 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms