RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 DEFB108BQ8NET1 73 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 ZNF418Q8TF45 676 aaPredicted RBP16.61■□□□□ 0.25
SFXN1-209ENST00000508290 RAB40AQ8WXH6 277 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 PIGCQ92535 297 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 RDH12Q96NR8 316 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 GPR84Q9NQS5 396 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 C8orf4Q9NR00 106 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 ERVK-18Q9QC07 812 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 MRM2Q9UI43 246 aaKnown RBP16.61■□□□□ 0.25
SFXN1-209ENST00000508290 ENPP5Q9UJA9 477 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 AUP1Q9Y679 476 aa16.61■□□□□ 0.25
SFXN1-209ENST00000508290 SVEP1Q4LDE5 3571 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 LOC105371242A0A075B767 164 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 ZNF850A8MQ14 1090 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 PRR32B1ATL7 298 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 E9PQ18 207 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 TRAPPC2LH3BP13 241 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 ADRA2CP18825 462 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 GNG3P63215 75 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 HNRNPA0Q13151 305 aaKnown RBP16.6■□□□□ 0.25
SFXN1-209ENST00000508290 ZSCAN26Q16670 478 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 MICBQ29980 383 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 CEACAM21Q3KPI0 293 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 FAM201AQ5SY85 155 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 WDR82Q6UXN9 313 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 C1orf229Q6ZS94 237 aaPredicted RBP16.6■□□□□ 0.25
SFXN1-209ENST00000508290 ZBTB49Q6ZSB9 765 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 USP43Q70EL4 1123 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 FAM220AQ7Z4H9 259 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 KCTD20Q7Z5Y7 419 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 WDR86Q86TI4 376 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 OR10H4Q8NGA5 316 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 OR51E1Q8TCB6 317 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 Q96MT0 163 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 JMJD8Q96S16 334 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 APOL4Q9BPW4 351 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.6■□□□□ 0.25
SFXN1-209ENST00000508290 KAAG1Q9UBP8 84 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 OPN4Q9UHM6 478 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 OR52A1Q9UKL2 312 aa16.6■□□□□ 0.25
SFXN1-209ENST00000508290 IGHV2-70DA0A0C4DH43 119 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 A0A1W2PQL4 384 aaPredicted RBP16.59■□□□□ 0.25
SFXN1-209ENST00000508290 METTL15A6NJ78 407 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 SRRM5B3KS81 715 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 FSHBP01225 129 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 TTRP02766 147 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 LIPFP07098 398 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 FPR2P25090 351 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 WDR25Q64LD2 544 aaPredicted RBP16.59■□□□□ 0.25
SFXN1-209ENST00000508290 EGFL6Q8IUX8 553 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 C11orf53Q8IXP5 236 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 YIPF7Q8N8F6 280 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 OR5A2Q8NGI9 324 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 LRRC29Q8WV35 223 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 ZFAND2BQ8WV99 257 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 MRPL48Q96GC5 212 aaKnown RBP16.59■□□□□ 0.25
SFXN1-209ENST00000508290 RNF170Q96K19 258 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 DNTTIP1Q9H147 329 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 OCEL1Q9H607 264 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 MMP26Q9NRE1 261 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 GTF2A1LQ9UNN4 478 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 GMPPBQ9Y5P6 360 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 COL6A5A8TX70 2615 aa16.59■□□□□ 0.25
SFXN1-209ENST00000508290 KIR2DS1A0A191URI9 304 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 C3orf80F5H4A9 247 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 CDIPTO14735 213 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 ENSAO43768 121 aaKnown RBP16.58■□□□□ 0.24
SFXN1-209ENST00000508290 AVPP01185 164 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 PAX2Q02962 417 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 PAX8Q06710 450 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 MFGE8Q08431 387 aaPredicted RBP16.58■□□□□ 0.24
SFXN1-209ENST00000508290 ARMCX4Q5H9R4 360 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 ZNF684Q5T5D7 378 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 Q6ZSR3 168 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 ZNF826PQ6ZT77 177 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 KCTD8Q6ZWB6 473 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 DOK3Q7L591 496 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 SLC36A1Q7Z2H8 476 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 BOLLQ8N9W6 283 aaKnown RBP16.58■□□□□ 0.24
SFXN1-209ENST00000508290 DACT3Q96B18 629 aaPredicted RBP16.58■□□□□ 0.24
SFXN1-209ENST00000508290 FAM71F1Q96KD3 344 aaPredicted RBP16.58■□□□□ 0.24
SFXN1-209ENST00000508290 SUCNR1Q9BXA5 334 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 TTTY10Q9BZA0 68 aa16.58■□□□□ 0.24
SFXN1-209ENST00000508290 DLGAP1O14490 977 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 TNFRSF13BO14836 293 aaPredicted RBP16.57■□□□□ 0.24
SFXN1-209ENST00000508290 GPR37O15354 613 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 ADAM20O43506 726 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 ENTPD6O75354 484 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 ECDO95905 644 aaPredicted RBP16.57■□□□□ 0.24
SFXN1-209ENST00000508290 CCL1P22362 96 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 CD80P33681 288 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 RBMXP38159 391 aaKnown RBP16.57■□□□□ 0.24
SFXN1-209ENST00000508290 ZIK1Q3SY52 487 aaPredicted RBP16.57■□□□□ 0.24
SFXN1-209ENST00000508290 SFRP4Q6FHJ7 346 aaPredicted RBP16.57■□□□□ 0.24
SFXN1-209ENST00000508290 ZNF841Q6ZN19 808 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 FAM90A1Q86YD7 464 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 HPSE2Q8WWQ2 592 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 DMRTB1Q96MA1 342 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 TECTBQ96PL2 329 aa16.57■□□□□ 0.24
SFXN1-209ENST00000508290 TBX5Q99593 518 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms