RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PNO1Q9NRX1 252 aaKnown RBP15.68■□□□□ 0.1
NUP54-205ENST00000507257 EHFQ9NZC4 300 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 NSG2Q9Y328 171 aa15.68■□□□□ 0.1
NUP54-205ENST00000507257 TMEM184BQ9Y519 407 aaPredicted RBP15.68■□□□□ 0.1
NUP54-205ENST00000507257 hCG_1809904A0A1W2PP81 198 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 A0A1W2PR64 198 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 A0A1W2PRV1 198 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 LINC01553A4QN01 128 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 SERPINE3A8MV23 424 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 TMEM150CB9EJG8 249 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 IFNA21P01568 189 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 P2RY1P47900 373 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 SNU13P55769 128 aaKnown RBP15.67■□□□□ 0.1
NUP54-205ENST00000507257 CSNK2A1P68400 391 aaPredicted RBP15.67■□□□□ 0.1
NUP54-205ENST00000507257 DNLZQ5SXM8 178 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 GPR157Q5UAW9 335 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 HEPN1Q6WQI6 88 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 Q6ZSR6 202 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 SFTPA2Q8IWL1 248 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 FAM24BQ8N5W8 94 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 CSNK2A3Q8NEV1 391 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 OR10S1Q8NGN2 331 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 FBXO17Q96EF6 278 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 DNAJA3Q96EY1 480 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 C5orf34Q96MH7 638 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 S100A13Q99584 98 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 OR8D2Q9GZM6 311 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 ATG2BQ96BY7 2078 aa15.67■□□□□ 0.1
NUP54-205ENST00000507257 IGKV1D-43A0A0B4J1Z2 117 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 OR3A4PP47883 348 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 SSTP61278 116 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 H1FNTQ75WM6 255 aaPredicted RBP15.66■□□□□ 0.1
NUP54-205ENST00000507257 SGPP2Q8IWX5 399 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 LRRC18Q8N456 261 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 TMEM234Q8WY98 164 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 OR11A1Q9GZK7 315 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 RAB33BQ9H082 229 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 HDGFL3Q9Y3E1 203 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 DOCK8Q8NF50 2099 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 CRYM-AS1A6NIL9 109 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 CDX1P47902 265 aaPredicted RBP15.66■□□□□ 0.1
NUP54-205ENST00000507257 PLCXD2Q0VAA5 305 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 OR2B11Q5JQS5 317 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 ADAM5Q6NVV9 412 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 RPUSD3Q6P087 351 aaKnown RBP15.66■□□□□ 0.1
NUP54-205ENST00000507257 GNRHR2Q96P88 292 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 TGM7Q96PF1 710 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 CHRNA10Q9GZZ6 450 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 KCNJ16Q9NPI9 418 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 C19orf12Q9NSK7 152 aa15.66■□□□□ 0.1
NUP54-205ENST00000507257 A0A0C4DFX4 3053 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 C10orf142B7Z368 130 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 ZNF878C9JN71 531 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 GMFGO60234 142 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 SLC34A2O95436 690 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 SLC35A1P78382 337 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 HSF1Q00613 529 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 CLINT1Q14677 625 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 ZNF565Q8N9K5 539 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 OR51E1Q8TCB6 317 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 ST8SIA1Q92185 356 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 PHF3Q92576 2039 aaKnown RBP15.65■□□□□ 0.1
NUP54-205ENST00000507257 GAL3ST4Q96RP7 486 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 TM2D1Q9BX74 207 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 EIF5A2Q9GZV4 153 aaKnown RBP15.65■□□□□ 0.1
NUP54-205ENST00000507257 PCNX3Q9H6A9 2034 aa15.65■□□□□ 0.1
NUP54-205ENST00000507257 C17orf51A8MQB3 221 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 MASP2O00187 686 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 GPR137BO60478 399 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 CAMLGP49069 296 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 TGIF1Q15583 401 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 HLA-DQA1Q5Y7H0 255 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 GGNBP1Q5YKI7 109 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 OR8G5Q8NG78 346 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 TCEAL2Q9H3H9 227 aaPredicted RBP15.64■□□□□ 0.09
NUP54-205ENST00000507257 BANF2Q9H503 90 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 TCFL5Q9UL49 500 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 TMED3Q9Y3Q3 217 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 RHPN2P1A8MT19 583 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 NME2P1O60361 137 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 CRTAPO75718 401 aaPredicted RBP15.64■□□□□ 0.09
NUP54-205ENST00000507257 SLC2A1P11166 492 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 FOSL1P15407 271 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 DHPSP49366 369 aaPredicted RBP15.64■□□□□ 0.09
NUP54-205ENST00000507257 CHRFAM7AQ494W8 412 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 RNF144BQ7Z419 303 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 C9orf40Q8IXQ3 194 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 SLC22A18ASQ8N1D0 253 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 ERGIC1Q969X5 290 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 RSRP1Q9BUV0 290 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 ST6GALNAC5Q9BVH7 336 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 BCO1Q9HAY6 547 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 CHST11Q9NPF2 352 aa15.64■□□□□ 0.09
NUP54-205ENST00000507257 SDCBPO00560 298 aaPredicted RBP15.63■□□□□ 0.09
NUP54-205ENST00000507257 ADAM10O14672 748 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 ZNF17P17021 662 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 CHATP28329 748 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 CD81P60033 236 aa15.63■□□□□ 0.09
NUP54-205ENST00000507257 RPS23P62266 143 aaKnown RBP15.63■□□□□ 0.09
NUP54-205ENST00000507257 ZNF616Q08AN1 781 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms