RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 TMPRSS11AQ6ZMR5 421 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 SLC16A12Q6ZSM3 486 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 UTS2BQ765I0 119 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 DOK3Q7L591 496 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ZNF367Q7RTV3 350 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 FAM220AQ7Z4H9 259 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TMEM200AQ86VY9 491 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 NR2C2APQ86WQ0 139 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 BHLHE23Q8NDY6 225 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TSPAN14Q8NG11 270 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 OR51A2Q8NGJ7 313 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 OR5L1Q8NGL2 311 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 OR5AK2Q8NH90 309 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 OR5P3Q8WZ94 311 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 NINJ1Q92982 152 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 DVL3Q92997 716 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 YIPF5Q969M3 257 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 PIGTQ969N2 578 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 C10orf35Q96D05 121 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 FAM71F1Q96KD3 344 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 C1orf147Q96MC9 270 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 DERL3Q96Q80 235 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 CACNG6Q9BXT2 260 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 OR10A2Q9H208 303 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 DCAF16Q9NXF7 216 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TAAR3PQ9P1P4 343 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 GPR160Q9UJ42 338 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 POU2F3Q9UKI9 436 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 HHLA2Q9UM44 414 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 PLEKHA6Q9Y2H5 1048 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ZNF281Q9Y2X9 895 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 SPEF1Q9Y4P9 236 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 CACNG2Q9Y698 323 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ZNF816-ZNF321PA0A0X1KG74 233 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 PNMA8CA0A1B0GUJ8 204 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 PQLC2LA1A4F0 135 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 ANKRD61A6NGH8 418 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 VWC2LB2RUY7 222 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 F5H5P2 479 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 H3BSH0 61 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 TNFRSF13BO14836 293 aaPredicted RBP4.17□□□□□ -1.74
LMNB1-208ENST00000504788 TBX1O43435 398 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 SYT7O43581 403 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 LHBP01229 141 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 UCHL1P09936 223 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 FSTP19883 344 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 CA6P23280 308 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 CFL1P23528 166 aaKnown RBP4.17□□□□□ -1.74
LMNB1-208ENST00000504788 CFHR2P36980 270 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 CD200P41217 278 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 MAP2K3P46734 347 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 ZNF81P51508 661 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 TAS2R43P59537 309 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 RPS25P62851 125 aaKnown RBP4.17□□□□□ -1.74
LMNB1-208ENST00000504788 MALLQ13021 153 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 RIN1Q13671 783 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 Q499Y3 187 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 ARMCX4Q5H9R4 360 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 CEP78Q5JTW2 689 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 FAM209AQ5JX71 171 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 FAM166AQ6J272 317 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 KCTD8Q6ZWB6 473 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 MRPL21Q7Z2W9 205 aaKnown RBP4.17□□□□□ -1.74
LMNB1-208ENST00000504788 CALHM1Q8IU99 346 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 FBXL14Q8N1E6 418 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 LRRC75A-AS1Q8N1F1 130 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 CELF2-AS1Q8N7Q2 184 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 CCDC54Q8NEL0 328 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 SEMA6DQ8NFY4 1073 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 OR10AD1Q8NGE0 317 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 OR13F1Q8NGS4 319 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 TMEM106AQ96A25 262 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 TMIGD2Q96BF3 282 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 YIPF6Q96EC8 236 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 OR14A2Q96R54 314 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 MS4A5Q9H3V2 200 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 SP140LQ9H930 580 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 GCM1Q9NP62 436 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 IL19Q9UHD0 177 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 N6AMT1Q9Y5N5 214 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.17□□□□□ -1.741e-6■■□□□ 12.4
LMNB1-208ENST00000504788 DOCK11Q5JSL3 2073 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 CREBBPQ92793 2442 aa4.17□□□□□ -1.74
LMNB1-208ENST00000504788 ARHGAP32A7KAX9 2087 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 A0A087WXM4 84 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 A0A0G2JK05 382 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 ZNF850A8MQ14 1090 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 ZNF879B4DU55 563 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 F8VVB4 439 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 F8VWA3 439 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 LYNX1G3V0Z9 82 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 F12P00748 615 aaPredicted RBP4.16□□□□□ -1.74
LMNB1-208ENST00000504788 LYNX1P0DP58 116 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 AMY2BP19961 511 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 GALP22466 123 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 EEF1B2P24534 225 aaKnown RBP4.16□□□□□ -1.74
LMNB1-208ENST00000504788 COL8A2P25067 703 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 CFPP27918 469 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 GCH1P30793 250 aa4.16□□□□□ -1.74
LMNB1-208ENST00000504788 FGF9P31371 208 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms