RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 GABARAPL2P60520 117 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 MZT1Q08AG7 82 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 MAB21L1Q13394 359 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 ODF4Q2M2E3 257 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 SPRNQ5BIV9 151 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 XAF1Q6GPH4 301 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 PRSS48Q7RTY5 328 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 RDH10Q8IZV5 341 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 WFDC11Q8NEX6 87 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 OR5AK2Q8NH90 309 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 C10orf105Q8TEF2 133 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 ITLN1Q8WWA0 313 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 PIGCQ92535 297 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 YIPF5Q969M3 257 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 C10orf35Q96D05 121 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 MEGF10Q96KG7 1140 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 Q96MF0 132 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 PAPOLGQ9BWT3 736 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 MND1Q9BWT6 205 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 TRIM36Q9NQ86 728 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 ENPP5Q9UJA9 477 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 HHLA2Q9UM44 414 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 PIGLQ9Y2B2 252 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 MALRD1Q5VYJ5 2156 aa10.08□□□□□ -0.8
PDLIM5-208ENST00000504489 ACANP16112 2415 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 CELSR1Q9NYQ6 3014 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 WNK2Q9Y3S1 2297 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 ANXA2P2A6NMY6 339 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF850A8MQ14 1090 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 LYNX1G3V0Z9 82 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 IFNL4K9M1U5 179 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 MRPS14O60783 128 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 ZFPL1O95159 310 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 MT-ND2P03891 347 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 LYNX1P0DP58 116 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 FAHP16930 419 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 GATA4P43694 442 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 CDH15P55291 814 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 TMEM33P57088 247 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 ACSM1Q08AH1 577 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 PRDX4Q13162 271 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 RIN1Q13671 783 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 CDK5R1Q15078 307 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 HFEQ30201 348 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 TMEM42Q69YG0 159 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 TGIF2LYQ8IUE0 185 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF676Q8N7Q3 588 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 ERGIC1Q969X5 290 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 PDCD1LG2Q9BQ51 273 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 COMMD4Q9H0A8 199 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 PPP1R3EQ9H7J1 279 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 CHODLQ9H9P2 273 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 GCM1Q9NP62 436 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 C14orf119Q9NWQ9 140 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 LSM2Q9Y333 95 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 SIRT4Q9Y6E7 314 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 ABCA2Q9BZC7 2435 aa10.07□□□□□ -0.8
PDLIM5-208ENST00000504489 ARHGAP32A7KAX9 2087 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 IGHV4-30-2A0A087WSY4 118 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 LOC100289279A0A1B0GTE1 492 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 VWC2LB2RUY7 222 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 CDC14BO60729 498 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 NRASP01111 189 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 CD1AP06126 327 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 EEF1B2P24534 225 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 BDH1Q02338 343 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 SLC3A1Q07837 685 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 SPHARQ15513 63 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF181Q2M3W8 571 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 CEACAM21Q3KPI0 293 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 CLVS2Q5SYC1 327 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 DMKNQ6E0U4 476 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 ZDHHC23Q8IYP9 409 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 OR5A2Q8NGI9 324 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 OR10AC1Q8NH08 325 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 OR8S1Q8NH09 359 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 OR5P3Q8WZ94 311 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 DVL3Q92997 716 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 SMIM19Q96E16 107 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 HIST1H2AAQ96QV6 131 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 MICU1Q9BPX6 476 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 CCDC90BQ9GZT6 254 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 ZNF275Q9NSD4 429 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 PPP1R3CQ9UQK1 317 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 F8P00451 2351 aa10.06□□□□□ -0.8
PDLIM5-208ENST00000504489 VPS13CQ709C8 3753 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 H3BSH0 61 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 PLPP2O43688 288 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 LMX1BO60663 402 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 SLC25A16P16260 332 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 RELBQ01201 579 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 DOC2BQ14184 412 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 CARTPTQ16568 116 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 FAM76BQ5HYJ3 339 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 MOB3CQ70IA8 216 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 OR51A4Q8NGJ6 313 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 HPSE2Q8WWQ2 592 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 PP6455Q8WZ26 134 aa10.05□□□□□ -0.8
PDLIM5-208ENST00000504489 CCL17Q92583 94 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms