RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 BIDP55957 195 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 MRPS11P82912 194 aaKnown RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 CDK3Q00526 305 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 LTBQ06643 244 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ATXN7L3Q14CW9 347 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 SERPINA9Q86WD7 417 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 MCEMP1Q8IX19 187 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 FAM185AQ8N0U4 392 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 CD177Q8N6Q3 437 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 OR4D5Q8NGN0 318 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 GPR119Q8TDV5 335 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ADAMTS15Q8TE58 950 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 SLC38A5Q8WUX1 472 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ATP6V0BQ99437 205 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 PRRX2Q99811 253 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 PAAF1Q9BRP4 392 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 CHODLQ9H9P2 273 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 KCNK12Q9HB15 430 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 TAF9BQ9HBM6 251 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ZDHHC4Q9NPG8 344 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 A4GNTQ9UNA3 340 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ASCC3Q8N3C0 2202 aaKnown RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 TRAV39A0A0B4J263 110 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 LEFTY2O00292 366 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 PRRG1O14668 218 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 YY2O15391 372 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ST8SIA3O43173 380 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 EFSO43281 561 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 PPIHO43447 177 aaKnown RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 LANCL1O43813 399 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 STK17BO94768 372 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 PCDH8O95206 1070 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 LRATO95237 230 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 RHOCP08134 193 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 CD99P14209 185 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 GNRHRP30968 328 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 GRK6P43250 576 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 P2RY1P47900 373 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 SLC6A11P48066 632 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 HLA-DRB3P79483 266 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 DUSP8Q13202 625 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 VAX1Q5SQQ9 334 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 LINC01590Q5TEZ4 76 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 DMRTA1Q5VZB9 504 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ASPHD2Q6ICH7 369 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 KCNIP4Q6PIL6 250 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 MYPOPQ86VE0 399 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 THOC6Q86W42 341 aaKnown RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 CLECL1Q8IZS7 167 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 COX18Q8N8Q8 333 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 C8orf31Q8N9H6 132 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 OR51D1Q8NGF3 324 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 RNF128Q8TEB7 428 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 HSD17B8Q92506 261 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 MUCL1Q96DR8 90 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 PELI1Q96FA3 418 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 CPNE2Q96FN4 548 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 MS4A8Q9BY19 250 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 PKIBQ9C010 78 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 SLC25A31Q9H0C2 315 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 BANF2Q9H503 90 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ZMAT3Q9HA38 289 aaKnown RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 FKBP11Q9NYL4 201 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 UQCR10Q9UDW1 63 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 UTS2RQ9UKP6 389 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 IKZF2Q9UKS7 526 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 SRPK3Q9UPE1 567 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ASF1AQ9Y294 204 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 TRBV4-1A0A0J9YWV2 114 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 LOC100289279A0A1B0GTE1 492 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 COCHO43405 550 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 GPR137BO60478 399 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 CDS2O95674 445 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 TYMSP04818 313 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 FAM157CP0CG43 387 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ACP5P13686 325 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 BUD31P41223 144 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 OR1E2P47887 323 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 TAS2R46P59540 309 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 RUNX2Q13950 521 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 ELAVL1Q15717 326 aaKnown RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 HIKESHIQ53FT3 197 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 VWA1Q6PCB0 445 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 PAQR6Q6TCH4 344 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 SGPP2Q8IWX5 399 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 DND1Q8IYX4 353 aaKnown RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 LRTM2Q8N967 370 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 OR51S1Q8NGJ8 323 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 LRRN4Q8WUT4 740 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 RGP1Q92546 391 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-204ENST00000503468 RASD2Q96D21 266 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 SCLYQ96I15 445 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 SHDQ96IW2 340 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 NRSN2Q9GZP1 204 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 Q9N2K0 584 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 DNAJC4Q9NNZ3 241 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 POT1Q9NUX5 634 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 RHCGQ9UBD6 479 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 TGIF2-C20orf24A0A0A6YYL0 155 aa2.47□□□□□ -2.01
NEDD4-204ENST00000503468 NPIPA5A0A0B4J1W7 369 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms