RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 RRASP10301 218 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 NAT2P11245 290 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 SLC25A4P12235 298 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 ZBTB25P24278 435 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 CD96P40200 585 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 ECI1P42126 302 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 PTGFRP43088 359 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 NOVA1P51513 510 aaKnown RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 UBA52P62987 128 aaKnown RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 ZNF345Q14585 488 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 HLXQ14774 488 aaPredicted RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 CNN3Q15417 329 aaKnown RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 NHLRC3Q5JS37 347 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 PHYHD1Q5SRE7 291 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 SLC16A14Q7RTX9 510 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 SLC51BQ86UW2 128 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 CD163Q86VB7 1156 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 COMMD7Q86VX2 200 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 FAM89BQ8N5H3 189 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 OR6K3Q8NGY3 331 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 HAS2Q92819 552 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 CPNE4Q96A23 557 aaPredicted RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 LIN37Q96GY3 246 aaPredicted RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 PDCD10Q9BUL8 212 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 TM2D1Q9BX74 207 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 SRXN1Q9BYN0 137 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 MFFQ9GZY8 342 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 ARL6Q9H0F7 186 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 B4GALT7Q9UBV7 327 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 VSIG4Q9Y279 399 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 KCNK7Q9Y2U2 307 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 SESN1Q9Y6P5 492 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 TPRP12270 2363 aaKnown RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 C21orf140B9A014 251 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 SSX5O60225 188 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 DUS4LO95620 317 aaKnown RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 POU3F2P20265 443 aaPredicted RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 PRKACBP22694 351 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 CALCRP30988 508 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 IL13RA1P78552 427 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 ARFRP1Q13795 201 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 STK11Q15831 433 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 C2orf68Q2NKX9 166 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 NRN1LQ496H8 165 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 TMEM164Q5U3C3 297 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 ZNF468Q5VIY5 522 aaPredicted RBP10.51□□□□□ -0.73
NUP54-202ENST00000502850 DCAF12L2Q5VW00 463 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 AAED1Q7RTV5 226 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 GGNQ86UU5 652 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 HOGA1Q86XE5 327 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 LRRC18Q8N456 261 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 SEMA6DQ8NFY4 1073 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 OR51T1Q8NGJ9 327 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 OR5H2Q8NGV7 314 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 TECTBQ96PL2 329 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 CDC6Q99741 560 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 NICN1Q9BSH3 213 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 GPR87Q9BY21 358 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 TMEM38BQ9NVV0 291 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 P4HTMQ9NXG6 502 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 PIGLQ9Y2B2 252 aa10.51□□□□□ -0.73
NUP54-202ENST00000502850 A0A0A6YYD4 124 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 A0A0B4J2A0 478 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 IGKV1-9A0A0C4DH69 117 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 C9orf170A2RU37 121 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 OR5H15A6NDH6 313 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 OR5H14A6NHG9 310 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 LRRC3CA6NJW4 275 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 ZNF716A6NP11 495 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 CEACAM18A8MTB9 384 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 CDK2AP1O14519 115 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 SHOXO15266 292 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 OR2F2O95006 317 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 CEACAM1P13688 526 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 MGMTP16455 207 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 AMY2BP19961 511 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 CNR1P21554 472 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 CRYGSP22914 178 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 CYCSP99999 105 aaKnown RBP10.5□□□□□ -0.73
NUP54-202ENST00000502850 SORDQ00796 357 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 OC90Q02509 493 aaPredicted RBP10.5□□□□□ -0.73
NUP54-202ENST00000502850 OR2F1Q13607 317 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 SLC22A6Q4U2R8 563 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 TOR2AQ5JU69 321 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 LY6G6FQ5SQ64 297 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 NSUN5P2Q63ZY6 315 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 OR52W1Q6IF63 320 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 YRDCQ86U90 279 aaKnown RBP10.5□□□□□ -0.73
NUP54-202ENST00000502850 GVQW1Q8N7I0 195 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 TMEM104Q8NE00 496 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 OR1F12Q8NHA8 337 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 TERB2Q8NHR7 220 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 FBXW5Q969U6 566 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 TMEM45BQ96B21 275 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 ADGRG7Q96K78 797 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 LYZL4Q96KX0 146 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 SPACA5Q96QH8 159 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 ZNF224Q9NZL3 707 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 SHPKQ9UHJ6 478 aa10.5□□□□□ -0.73
NUP54-202ENST00000502850 OR6C6A6NF89 314 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms