RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 GPR132Q9UNW8 380 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 V9GYS6 101 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 A0A0U1RQV5 110 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 C13orf42A0A1B0GVH6 325 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 CEACAM18A8MTB9 384 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 DHHO43323 396 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 HPNP05981 417 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 KLK3P07288 261 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 SERPINA2P20848 420 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 THBS4P35443 961 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 GUCA1AP43080 201 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 HIST1H3AP68431 136 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 BTN1A1Q13410 526 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 ACTBL2Q562R1 376 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 TMEM128Q5BJH2 165 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 HIST2H3PS2Q5TEC6 136 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 MOB3CQ70IA8 216 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 HIST2H3AQ71DI3 136 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 ZIC4Q8N9L1 334 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 PNLDC1Q8NA58 520 aaKnown RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 OR5H2Q8NGV7 314 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 OR13G1Q8NGZ3 307 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 ROBO4Q8WZ75 1007 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 PIGTQ969N2 578 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 SRXN1Q9BYN0 137 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 FOXD3Q9UJU5 478 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 A0A0J9YW62 118 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 SDCBPO00560 298 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 EIF1BO60739 113 aaKnown RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 HTR3BO95264 441 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 NAT2P11245 290 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 AMY2BP19961 511 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 OTX1P32242 354 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 ALDH3B1P43353 468 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 SUPT4H1P63272 117 aaKnown RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 SLC9A3R2Q15599 337 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 SNAI3Q3KNW1 292 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 AADACL3Q5VUY0 350 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 CLEC18BQ6UXF7 455 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 PEG10Q86TG7 708 aaKnown RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 LHFPL1Q86WI0 220 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 ARMC10Q8N2F6 343 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 TMEM156Q8N614 296 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 ZBTB44Q8NCP5 570 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 M1APQ8TC57 530 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 ZNF775Q96BV0 537 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 FBXO17Q96EF6 278 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 RTBDNQ9BSG5 229 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 ST6GALNAC5Q9BVH7 336 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 CHST5Q9GZS9 411 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 CHMP1AQ9HD42 196 aaPredicted RBP8.64□□□□□ -1.03
CLIP1-204ENST00000501271 PIGLQ9Y2B2 252 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 CSAG2Q9Y5P2 127 aa8.64□□□□□ -1.03
CLIP1-204ENST00000501271 A0A0G2JMM0 328 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 A0A1W2PPB8 328 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 A0A1W2PRS3 328 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 MPTX1A8MV57 137 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 KIR3DP1A8MWS1 328 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 C9J4A7 227 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 M0R135 149 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 NTN3O00634 580 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 SIGLEC5O15389 551 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 ADAP1O75689 374 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 VAMP5O95183 116 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 FCGR2AP12318 317 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 PGAM2P15259 253 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 FPR2P25090 351 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 PSMB6P28072 239 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 BLVRBP30043 206 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 STARP49675 285 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 SNU13P55769 128 aaKnown RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 SIGLEC14Q08ET2 396 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 EIF3IQ13347 325 aaKnown RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 ELP2Q6IA86 826 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 INO80EQ8NBZ0 244 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 AGBL5Q8NDL9 886 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 TMEM185AQ8NFB2 350 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 OR2Y1Q8NGV0 311 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 ZNF799Q96GE5 643 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 PECRQ9BY49 303 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 ULBP2Q9BZM5 246 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 HPF1Q9NWY4 346 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 PLEK2Q9NYT0 353 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 CCDC163A0A0D9SF12 145 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 F5H0A9 414 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 SFT2D2O95562 160 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 PDGFBP01127 241 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 CBX5P45973 191 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 MLF1P58340 268 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 PPIAP62937 165 aaKnown RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 CSNK2A1P68400 391 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 TAGLNQ01995 201 aaKnown RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 SNTB1Q13884 538 aaKnown RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 FAM189A2Q15884 450 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 UNQ6126/PRO20091Q6UXV3 157 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 RPS19BP1Q86WX3 136 aaKnown RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 MAML2Q8IZL2 1156 aaPredicted RBP8.63□□□□□ -1.03
CLIP1-204ENST00000501271 SPERTQ8NA61 448 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 BHLHE23Q8NDY6 225 aa8.63□□□□□ -1.03
CLIP1-204ENST00000501271 PP6455Q8WZ26 134 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms