RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, human

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMPCB-208	ENST00000498530	TP53TG5	Q9Y2B4	290 aa		4.21	□□□□□ -1.74
PMPCB-208	ENST00000498530	DHX57	Q6P158	1386 aa	Known RBP	4.21	□□□□□ -1.74
PMPCB-208	ENST00000498530	C2orf16	Q68DN1	1984 aa		4.21	□□□□□ -1.74
PMPCB-208	ENST00000498530	LTBP1	Q14766	1721 aa		4.21	□□□□□ -1.74
PMPCB-208	ENST00000498530	QSER1	Q2KHR3	1735 aa		4.21	□□□□□ -1.74
PMPCB-208	ENST00000498530	NCOA3	Q9Y6Q9	1424 aa		4.21	□□□□□ -1.74
PMPCB-208	ENST00000498530	USP42	Q9H9J4	1324 aa	Known RBP	4.21	□□□□□ -1.74
PMPCB-208	ENST00000498530	TRPC5OS	A6NMA1	111 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	ZNF593	O00488	134 aa	Predicted RBP	4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	PLPP3	O14495	311 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	RAD51B	O15315	384 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	FABP3	P05413	133 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	IGHV4-34	P06331	123 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	OR5AL1	P0C617	328 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	TCP1	P17987	556 aa	Known RBP	4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	CRAT	P43155	626 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	CYB561	P49447	251 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	P2RX1	P51575	399 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	OR2B6	P58173	313 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	RPS23	P62266	143 aa	Known RBP	4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	C2orf54	Q08AI8	447 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	SLAMF1	Q13291	335 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	PON2	Q15165	354 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	ZBTB6	Q15916	424 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	SSX6	Q7RTT6	188 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	OR7G1	Q8NGA0	311 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	OR10G4	Q8NGN3	311 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	OR2Y1	Q8NGV0	311 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	LRRC29	Q8WV35	223 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	GTF2H4	Q92759	462 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	IMMP1L	Q96LU5	166 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	TIMM29	Q9BSF4	260 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	BBS2	Q9BXC9	721 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	PLEKHA1	Q9HB21	404 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	RHBDL2	Q9NX52	303 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	TRMT112	Q9UI30	125 aa	Known RBP	4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	ZNF225	Q9UK10	706 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	KNDC1	Q76NI1	1749 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	DCC	P43146	1447 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	PCDH11X	Q9BZA7	1347 aa		4.2	□□□□□ -1.74
PMPCB-208	ENST00000498530	MBD5	Q9P267	1494 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	IGHV3-74	A0A0B4J1X5	117 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	SNAI2	O43623	268 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	RAD1	O60671	282 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	NDUFS6	O75380	124 aa	Known RBP	4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	E2F6	O75461	281 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	CGA	P01215	116 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	CTSL	P07711	333 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	PNMA6A	P0CW24	399 aa	Predicted RBP	4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	HTR1D	P28221	377 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	HCAR3	P49019	387 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	IFFO1	Q0D2I5	559 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	ZNF266	Q14584	549 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	TMEM183B	Q1AE95	376 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	ZNF691	Q5VV52	312 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	ARL9	Q6T311	187 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	TMEM183A	Q8IXX5	376 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	COX18	Q8N8Q8	333 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	OR11H7	Q8NGC8	314 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	ZFAND1	Q8TCF1	268 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	ARL5B	Q96KC2	179 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	SERPINB11	Q96P15	392 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	CIB1	Q99828	191 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	MED10	Q9BTT4	135 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	SLIRP	Q9GZT3	109 aa	Known RBP	4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	SAV1	Q9H4B6	383 aa	Predicted RBP	4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	EURL	Q9NYK6	297 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	CYB5R1	Q9UHQ9	305 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	SIGLEC9	Q9Y336	463 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	UBIAD1	Q9Y5Z9	338 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	SBF1	O95248	1867 aa		4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	TRO	Q12816	1431 aa	Predicted RBP	4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.19	□□□□□ -1.74
PMPCB-208	ENST00000498530	PALLD	Q8WX93	1383 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530		A0A0J9YXV3	536 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	LINC01619	G3V211	115 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	MKRN2OS	H3BPM6	223 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	B4GALT5	O43286	388 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	UPK1B	O75841	260 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	LDOC1	O95751	146 aa	Predicted RBP	4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	PCK1	P35558	622 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	RANBP1	P43487	201 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	NMU	P48645	174 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	UBE2N	P61088	152 aa	Known RBP	4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	TSPAN5	P62079	268 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	TPM4	P67936	248 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	PMS2P3	Q13401	168 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	DGCR6	Q14129	220 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	OR1Q1	Q15612	314 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	OR4D1	Q15615	310 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	FAM27D1	Q5T7N8	215 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	MYPOP	Q86VE0	399 aa	Predicted RBP	4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	SLC30A8	Q8IWU4	369 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	C11orf42	Q8N5U0	333 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	OR2L5	Q8NG80	312 aa		4.18	□□□□□ -1.74
PMPCB-208	ENST00000498530	DOK4	Q8TEW6	326 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms