RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 IZUMO1RA6ND01 250 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 C3orf84H3BNL1 204 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 AQP9O43315 295 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 ERI3O43414 337 aaKnown RBP1.17□□□□□ -2.22
SMC4-227ENST00000497984 CCNB2O95067 398 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 CLTAP09496 248 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 GABRG2P18507 467 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 RAB5AP20339 215 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 GGT2P36268 569 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 NBL1P41271 181 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 SERPINB8P50452 374 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 C21orf59P57076 290 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 RGS8P57771 180 aaPredicted RBP1.17□□□□□ -2.22
SMC4-227ENST00000497984 UBE2MP61081 183 aaKnown RBP1.17□□□□□ -2.22
SMC4-227ENST00000497984 HMGN5P82970 282 aaKnown RBP1.17□□□□□ -2.22
SMC4-227ENST00000497984 TRDNQ13061 729 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 IDI1Q13907 227 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 C6orf99Q4VX62 202 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 ZNF660Q6AZW8 331 aaPredicted RBP1.17□□□□□ -2.22
SMC4-227ENST00000497984 RWDD4Q6NW29 188 aaKnown RBP1.17□□□□□ -2.22
SMC4-227ENST00000497984 TMPPEQ6ZT21 453 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 ACTL9Q8TC94 416 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 SNF8Q96H20 258 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 PLIN2Q99541 437 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 GEMIN7Q9H840 131 aaKnown RBP1.17□□□□□ -2.22
SMC4-227ENST00000497984 NMRK1Q9NWW6 199 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 INSRP06213 1382 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 KIAA1671Q9BY89 1806 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 PRR14LQ5THK1 2151 aa1.17□□□□□ -2.22
SMC4-227ENST00000497984 CACNA1DQ01668 2161 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 IGKV1-6A0A0C4DH72 117 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 KBTBD11-OT1A0A1B0GTJ5 212 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 TMEM72A0PK05 275 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 TEX46H3BTG2 121 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 CDH16O75309 829 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 NRASP01111 189 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 HRASP01112 189 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 KRASP01116 189 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 RFC3P40938 356 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 RAB9AP51151 201 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 OR2B8PP59922 312 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 TRMT5Q32P41 509 aaKnown RBP1.16□□□□□ -2.22
SMC4-227ENST00000497984 FA2HQ7L5A8 372 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 PAGE2Q7Z2X7 111 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 GABRG1Q8N1C3 465 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 JAGN1Q8N5M9 183 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 PQLC3Q8N755 202 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 OR52E5Q8NH55 327 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 FAM81AQ8TBF8 368 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 MRPL48Q96GC5 212 aaKnown RBP1.16□□□□□ -2.22
SMC4-227ENST00000497984 SMARCD1Q96GM5 515 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 IGF2BP2-AS1Q96M15 143 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 CHP1Q99653 195 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 MS4A8Q9BY19 250 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 FAM192AQ9GZU8 254 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 RBFOX1Q9NWB1 397 aaKnown RBP1.16□□□□□ -2.22
SMC4-227ENST00000497984 GCNT4Q9P109 453 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 STX18Q9P2W9 335 aaKnown RBP1.16□□□□□ -2.22
SMC4-227ENST00000497984 RAB22AQ9UL26 194 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 RAB23Q9ULC3 237 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 ZNF257Q9Y2Q1 563 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 JCADQ9P266 1359 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 SVILO95425 2214 aa1.16□□□□□ -2.22
SMC4-227ENST00000497984 SPATA31E1Q6ZUB1 1445 aa1.15□□□□□ -2.22
SMC4-227ENST00000497984 COL5A3P25940 1745 aaPredicted RBP1.15□□□□□ -2.22
SMC4-227ENST00000497984 SYNGR2O43760 224 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 AGTP01019 485 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 IGKV1-39P01597 117 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 IGKV1D-39P04432 117 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 ERCC1P07992 297 aaPredicted RBP1.15□□□□□ -2.23
SMC4-227ENST00000497984 SLC35G6P0C7Q6 338 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 CXCR1P25024 350 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 RPS15AP62244 130 aaKnown RBP1.15□□□□□ -2.23
SMC4-227ENST00000497984 BEX3Q00994 111 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 MERTKQ12866 999 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 HHATQ5VTY9 493 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 TMEM236Q5W0B7 351 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 KDM4DQ6B0I6 523 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 METAP1DQ6UB28 335 aaPredicted RBP1.15□□□□□ -2.23
SMC4-227ENST00000497984 CENPQQ7L2Z9 268 aaPredicted RBP1.15□□□□□ -2.23
SMC4-227ENST00000497984 LRRC8AQ8IWT6 810 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 VKORC1L1Q8N0U8 176 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 MCUR1Q96AQ8 359 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 GSDMAQ96QA5 445 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 PEBP4Q96S96 227 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 TBL1XR1Q9BZK7 514 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 API5Q9BZZ5 524 aaKnown RBP1.15□□□□□ -2.23
SMC4-227ENST00000497984 FANCEQ9HB96 536 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 CAB39Q9Y376 341 aaPredicted RBP1.15□□□□□ -2.23
SMC4-227ENST00000497984 MROH5Q6ZUA9 1318 aa1.15□□□□□ -2.23
SMC4-227ENST00000497984 KCNE1BA0A087WTH5 132 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 SDHAF1A6NFY7 115 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 CCDC169A6NNP5 214 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 CCDC22O60826 627 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 CTNSO60931 367 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 FCN3O75636 299 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 FARS2O95363 451 aaKnown RBP1.14□□□□□ -2.23
SMC4-227ENST00000497984 PTHP01270 115 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 HLA-HP01893 362 aa1.14□□□□□ -2.23
SMC4-227ENST00000497984 OR5AC1P0C628 307 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms