RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 CLEC5AQ9NY25 188 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 EURLQ9NYK6 297 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 PTTG3PQ9NZH4 202 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 XCL2Q9UBD3 114 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 CACNG5Q9UF02 275 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC2A6Q9UGQ3 507 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 STAP1Q9ULZ2 295 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF256Q9Y2P7 627 aaPredicted RBP1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 YARS2Q9Y2Z4 477 aaKnown RBP1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRIP11Q15643 1979 aa1.85□□□□□ -2.11
CKS1BP2-201ENST00000497342 ALMS1Q8TCU4 4167 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGLV7-46A0A075B6I9 117 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 IGHV3OR16-13A0A075B7E8 117 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TSPAN11A1L157 253 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 ERICH2A1L162 156 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF233A6NK53 670 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF726A6NNF4 738 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 H3BN98 237 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TEX46H3BTG2 121 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 RFXANKO14593 260 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 GATCO43716 136 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 LMX1BO60663 402 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 NIPSNAP2O75323 286 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 LYPLA1O75608 230 aaPredicted RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 STATHP02808 62 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 S100A6P06703 90 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRIM49P0CI25 452 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRIM49CP0CI26 452 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 CCDC166P0CW27 439 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 RBMY1A1P0DJD3 496 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 PRB4P10163 310 aaPredicted RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TCN1P20061 433 aaPredicted RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 RAB4AP20338 218 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 HTR1FP30939 366 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR1E1P30953 314 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 HTR2BP41595 481 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 GPR1P46091 355 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 HMGA2P52926 109 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 DLX1P56177 255 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 RPS15AP62244 130 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF92Q03936 586 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 LRRC63Q05C16 580 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 SLC10A7Q0GE19 358 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 CYLC2Q14093 348 aaPredicted RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 ZNF726P1Q15940 193 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 C2CD6Q53TS8 623 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 NHLRC3Q5JS37 347 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 SAMD4BQ5PRF9 694 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TIGD3Q6B0B8 471 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 ADNP2Q6IQ32 1131 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 ADAM5Q6NVV9 412 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 MBOAT1Q6ZNC8 495 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TPGS1Q6ZTW0 290 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 CATSPER3Q86XQ3 398 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 DOLPP1Q86YN1 238 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 CBLN2Q8IUK8 224 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 CCDC65Q8IXS2 484 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 CMTM1Q8IZ96 169 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 Q8N377 158 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 ARHGAP18Q8N392 663 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 PNKDQ8N490 385 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 FTMTQ8N4E7 242 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 PRELID2Q8N945 189 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 MDS2Q8NDY4 140 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TMEM104Q8NE00 496 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR2A1Q8NGT9 310 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR2Y1Q8NGV0 311 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 OR10R2Q8NGX6 335 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 PIH1D2Q8WWB5 315 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 RASL10AQ92737 203 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 RORBQ92753 470 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 NEIL2Q969S2 332 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 BMFQ96LC9 184 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 HSFY1Q96LI6 401 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 C1orf147Q96MC9 270 aaPredicted RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 CYTH2Q99418 400 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 PSMB7Q99436 277 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 LLPHQ9BRT6 129 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TRIM51Q9BSJ1 452 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 CHCHD5Q9BSY4 110 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 WACQ9BTA9 647 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 SIAEQ9HAT2 523 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 SDF2L1Q9HCN8 221 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 LHX9Q9NQ69 397 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 TIGARQ9NQ88 270 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 MIEF1Q9NQG6 463 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 RMND1Q9NWS8 449 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 STX18Q9P2W9 335 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 MTRF1LQ9UGC7 380 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 CRCT1Q9UGL9 99 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 APOBEC3BQ9UH17 382 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 ING4Q9UNL4 249 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 POFUT2Q9Y2G5 429 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 MRPS28Q9Y2Q9 187 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 PLLPQ9Y342 182 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 KCNE3Q9Y6H6 103 aa1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 YLPM1P49750 1951 aaKnown RBP1.84□□□□□ -2.11
CKS1BP2-201ENST00000497342 PCNX3Q9H6A9 2034 aa1.84□□□□□ -2.12
CKS1BP2-201ENST00000497342 DSCAMO60469 2012 aa1.83□□□□□ -2.12
CKS1BP2-201ENST00000497342 GOLGA8QA0A0J9YX86 632 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms