RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ZMAT5Q9UDW3 170 aaKnown RBP2.35□□□□□ -2.03
SMC4-225ENST00000497203 SIGLEC9Q9Y336 463 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 CBY1Q9Y3M2 126 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 BZW2Q9Y6E2 419 aaKnown RBP2.35□□□□□ -2.03
SMC4-225ENST00000497203 TNIKQ9UKE5 1360 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 IGLV3-12A0A075B6K2 115 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 A0A0A6YYD5 115 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 GSTTP1A0A1W2PQM5 241 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 CENPBD1B2RD01 187 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 KDELR3O43731 214 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 RBBP9O75884 186 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 PLEKHA8P1O95397 391 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 TRBV12-3P01733 135 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 CXCR1P25024 350 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 NUP62P37198 522 aaPredicted RBP2.34□□□□□ -2.03
SMC4-225ENST00000497203 PMELP40967 661 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 PRLHRP49683 370 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 UBE2E1P51965 193 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 PAFAH1B2P68402 229 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 SLC35B1P78383 322 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 ST3GAL4Q11206 333 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 PRSS8Q16651 343 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 ATP6V1FQ16864 119 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 SLC25A35Q3KQZ1 300 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 UNQ9165/PRO28630Q6UXU0 137 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 NEGR1Q7Z3B1 354 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 FAM58AQ8N1B3 248 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 TMEM234Q8WY98 164 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 GHSRQ92847 366 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 FAM19A4Q96LR4 140 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 UBE2E2Q96LR5 201 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 TSNAXQ99598 290 aaKnown RBP2.34□□□□□ -2.03
SMC4-225ENST00000497203 CDX2Q99626 313 aaPredicted RBP2.34□□□□□ -2.03
SMC4-225ENST00000497203 TMEM175Q9BSA9 504 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 TIMM29Q9BSF4 260 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 TM6SF2Q9BZW4 377 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 FBXO6Q9NRD1 293 aaPredicted RBP2.34□□□□□ -2.03
SMC4-225ENST00000497203 CFL2Q9Y281 166 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 SIGLEC7Q9Y286 467 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 ZNF835Q9Y2P0 537 aa2.34□□□□□ -2.03
SMC4-225ENST00000497203 IGLV2-18A0A075B6J9 118 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 H7C2Y5 167 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 SCO1O75880 301 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 CYB5R3P00387 301 aaPredicted RBP2.33□□□□□ -2.04
SMC4-225ENST00000497203 CSTAP01040 98 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 ZNF286BP0CG31 522 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 PTNP21246 168 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 PSMB5P28074 263 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 CARD18P57730 90 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 MTPNP58546 118 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 SLC35A1P78382 337 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 C6orf99Q4VX62 202 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 CPTPQ5TA50 214 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 FAM222AQ5U5X8 452 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 TMEM236Q5W0B7 351 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 SLC7A5P1Q8MH63 180 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 DRAM1Q8N682 238 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 ZNF645Q8N7E2 425 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 ZNF615Q8N8J6 731 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 ZNF709Q8N972 641 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 OR5T1Q8NG75 326 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 SFXN5Q8TD22 340 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 RXFP2Q8WXD0 754 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 DEDD2Q8WXF8 326 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 TFGQ92734 400 aaPredicted RBP2.33□□□□□ -2.04
SMC4-225ENST00000497203 MRPL48Q96GC5 212 aaKnown RBP2.33□□□□□ -2.04
SMC4-225ENST00000497203 SMARCD1Q96GM5 515 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 SNF8Q96H20 258 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 ZNF717Q9BY31 904 aaPredicted RBP2.33□□□□□ -2.04
SMC4-225ENST00000497203 ARV1Q9H2C2 271 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 OR51B5Q9H339 312 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 C6orf50Q9HD87 102 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 HEBP1Q9NRV9 189 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 C21orf62Q9NYP8 219 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 NDRG2Q9UN36 371 aaKnown RBP2.33□□□□□ -2.04
SMC4-225ENST00000497203 LRRC42Q9Y546 428 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 S4R3C0 116 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 JCADQ9P266 1359 aa2.33□□□□□ -2.04
SMC4-225ENST00000497203 TRAV8-4A0A0B4J246 113 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 IGHV2OR16-5A0A0B4J2B6 119 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 IGHV1-3A0A0C4DH29 117 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 COLCA2A8K830 154 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 M0R1X1 148 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 GATCO43716 136 aaKnown RBP2.32□□□□□ -2.04
SMC4-225ENST00000497203 TRAPPC6AO75865 159 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 P01737 135 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 RHOCP08134 193 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 ARR3P36575 388 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 HCCSP53701 268 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 INCA1Q0VD86 236 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 MOBPQ13875 183 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 HMGN2P46Q86SG4 172 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 RNF182Q8N6D2 247 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 ASCC1Q8N9N2 400 aaKnown RBP2.32□□□□□ -2.04
SMC4-225ENST00000497203 OR4A15Q8NGL6 344 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 ZFAND1Q8TCF1 268 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 ING5Q8WYH8 240 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 ZNF75CPQ92670 426 aaPredicted RBP2.32□□□□□ -2.04
SMC4-225ENST00000497203 TMEM159Q96B96 161 aa2.32□□□□□ -2.04
SMC4-225ENST00000497203 CENPNQ96H22 339 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms