RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 DUS4LO95620 317 aaKnown RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 DBHP09172 617 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 FCGR2AP12318 317 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 MGMTP16455 207 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 AKR1C4P17516 323 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 POU3F2P20265 443 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 VAMP1P23763 118 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 CPT2P23786 658 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 C11orf87Q6NUJ2 197 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 AAED1Q7RTV5 226 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 SLC16A14Q7RTX9 510 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 TIPARPQ7Z3E1 657 aaKnown RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 SLC51BQ86UW2 128 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 HOGA1Q86XE5 327 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 SEMA6DQ8NFY4 1073 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 OR5H2Q8NGV7 314 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF775Q96BV0 537 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF837Q96EG3 531 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM38BQ9NVV0 291 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 RDH8Q9NYR8 311 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 COL27A1Q8IZC6 1860 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 CCDC187A0A096LP49 1063 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 LRRC3CA6NJW4 275 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 SERPINE3A8MV23 424 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 EFSO43281 561 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 CXCL13O43927 109 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 CRYZL1O95825 349 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 RFPL3SP0C7P2 107 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 SLC25A4P12235 298 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 SERPINA2P20848 420 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 CRYGSP22914 178 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 GDF1P27539 372 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 CALCRP30988 508 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF345Q14585 488 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 AANATQ16613 207 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 CCDC157Q569K6 752 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM128Q5BJH2 165 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 WIPI1Q5MNZ9 446 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 PDSS1Q5T2R2 415 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 ABLIM2Q6H8Q1 611 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 TCEAL6Q6IPX3 200 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 ALKAL2Q6UX46 152 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 GALNTL5Q7Z4T8 443 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 OR10D3Q8NH80 312 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 MARCH1Q8TCQ1 289 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 TCEAL3Q969E4 200 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 CPNE4Q96A23 557 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 TM2D1Q9BX74 207 aa9.7□□□□□ -0.86
CMSS1-208ENST00000496116 ELL3Q9HB65 397 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF230Q9UIE0 474 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 BOKQ9UMX3 212 aaPredicted RBP9.7□□□□□ -0.86
CMSS1-208ENST00000496116 LINC01387J3KSC0 135 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 SYNGR3O43761 229 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 OR2F2O95006 317 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 AMY2BP19961 511 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 CNR1P21554 472 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 MPGP29372 298 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 BLVRBP30043 206 aaPredicted RBP9.69□□□□□ -0.86
CMSS1-208ENST00000496116 OR3A2P47893 321 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 NUBP1P53384 320 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 TAS2R46P59540 309 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 PCBD1P61457 104 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 OR2F1Q13607 317 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 PPA1Q15181 289 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 CNN3Q15417 329 aaKnown RBP9.69□□□□□ -0.86
CMSS1-208ENST00000496116 SNAI3Q3KNW1 292 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 DMRTC1Q5HYR2 192 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 RIPPLY2Q5TAB7 128 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 RTN4RL2Q86UN3 420 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 ADAD2Q8NCV1 583 aaKnown RBP9.69□□□□□ -0.86
CMSS1-208ENST00000496116 OR1F12Q8NHA8 337 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 CASTOR1Q8WTX7 329 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 PPP1R1CQ8WVI7 109 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 ROBO4Q8WZ75 1007 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 ST8SIA4Q92187 359 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 SPSB1Q96BD6 273 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 SGK3Q96BR1 496 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 ADGRG7Q96K78 797 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 ALKBH3Q96Q83 286 aaPredicted RBP9.69□□□□□ -0.86
CMSS1-208ENST00000496116 FOXB1Q99853 325 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 ARRDC1-AS1Q9H2J1 176 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 ZNF391Q9UJN7 358 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 SESN1Q9Y6P5 492 aa9.69□□□□□ -0.86
CMSS1-208ENST00000496116 KANTRA0A1W2PQU2 76 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 hCG_1807616A0A1W2PRN6 198 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 CEACAM18A8MTB9 384 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 FAM25EA8MYX2 175 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 CCSO14618 274 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 RAD51DO75771 328 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 STARP49675 285 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 UBA52P62987 128 aaKnown RBP9.68□□□□□ -0.86
CMSS1-208ENST00000496116 TMEM164Q5U3C3 297 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 CRIP3Q6Q6R5 217 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 C1QL2Q7Z5L3 287 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 COQ8AQ8NI60 647 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 PIGTQ969N2 578 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 REEP6Q96HR9 211 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 THOC3Q96J01 351 aaKnown RBP9.68□□□□□ -0.86
CMSS1-208ENST00000496116 PECRQ9BY49 303 aa9.68□□□□□ -0.86
CMSS1-208ENST00000496116 MED9Q9NWA0 146 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms