RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 CMTM4Q8IZR5 234 aa13.01□□□□□ -0.33
COL4A2-209ENST00000494852 MRAPQ8TCY5 172 aa13.01□□□□□ -0.33
COL4A2-209ENST00000494852 ST8SIA4Q92187 359 aa13.01□□□□□ -0.33
COL4A2-209ENST00000494852 CFHR4Q92496 578 aa13.01□□□□□ -0.33
COL4A2-209ENST00000494852 MRPL15Q9P015 296 aaKnown RBP13.01□□□□□ -0.33
COL4A2-209ENST00000494852 DNAH3Q8TD57 4116 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 FAM183AA6NL82 134 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 ZNF593O00488 134 aaPredicted RBP13□□□□□ -0.33
COL4A2-209ENST00000494852 NPFFO15130 113 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 SPARCP09486 303 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 TPTEP56180 551 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 MZT1Q08AG7 82 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 C1orf146Q5VVC0 180 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 DCXRQ7Z4W1 244 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 OR6K6Q8NGW6 343 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 SPTSSAQ969W0 71 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 DUS3LQ96G46 650 aaKnown RBP13□□□□□ -0.33
COL4A2-209ENST00000494852 PPA2Q9H2U2 334 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 MED20Q9H944 212 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 ONECUT1Q9UBC0 465 aa13□□□□□ -0.33
COL4A2-209ENST00000494852 RYR3Q15413 4870 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 M0R135 149 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 GLCEO94923 617 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 HMGN1P05114 100 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 GRPP07492 148 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 MUC1P15941 1255 aaPredicted RBP12.99□□□□□ -0.33
COL4A2-209ENST00000494852 OTX1P32242 354 aaPredicted RBP12.99□□□□□ -0.33
COL4A2-209ENST00000494852 KIR2DS4P43632 304 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 EFNB2P52799 333 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 ZNF92Q03936 586 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 FAHD1Q6P587 224 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 ZNF826PQ6ZT77 177 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 OR5K1Q8NHB7 308 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 DNAJC9Q8WXX5 260 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 ZNF799Q96GE5 643 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 SIRT7Q9NRC8 400 aa12.99□□□□□ -0.33
COL4A2-209ENST00000494852 GGT3PA6NGU5 568 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 PAHP00439 452 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 PAICSP22234 425 aaKnown RBP12.98□□□□□ -0.33
COL4A2-209ENST00000494852 GSTT1P30711 240 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 DAPP51397 102 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 POU4F2Q12837 409 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 ATP6AP1Q15904 470 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 MICBQ29980 383 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 FGFRL1Q8N441 504 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 Q8N7P7 452 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 TNFRSF14Q92956 283 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 SLAMF6Q96DU3 332 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 RNPEPL1Q9HAU8 725 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 SLC25A19Q9HC21 320 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 PAPOLBQ9NRJ5 636 aaKnown RBP12.98□□□□□ -0.33
COL4A2-209ENST00000494852 NECAP2Q9NVZ3 263 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 C14orf119Q9NWQ9 140 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 AP4S1Q9Y587 144 aa12.98□□□□□ -0.33
COL4A2-209ENST00000494852 IGHV3OR15-7A0A075B7D8 119 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.97□□□□□ -0.33
COL4A2-209ENST00000494852 hCG_1807616A0A1W2PRN6 198 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 A6NLC8 198 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 PRR23D1E9PI22 279 aaPredicted RBP12.97□□□□□ -0.33
COL4A2-209ENST00000494852 XPNPEP2O43895 674 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 PRR23D2P0DMB1 279 aaPredicted RBP12.97□□□□□ -0.33
COL4A2-209ENST00000494852 FASP25445 335 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 UBE2E1P51965 193 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 CRISP1P54107 249 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 ACSM1Q08AH1 577 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 SNAI3Q3KNW1 292 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 TMEM236Q5W0B7 351 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 PLBD1Q6P4A8 553 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 DRAM2Q6UX65 266 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 C1orf122Q6ZSJ8 110 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 ASRGL1Q7L266 308 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 SLC36A1Q7Z2H8 476 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 BEND2Q8NDZ0 799 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 C8orf46Q8TAG6 207 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 PPP1R35Q8TAP8 253 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 INTS14Q96SY0 518 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 CCL13Q99616 98 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 KCNJ15Q99712 375 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 COPS4Q9BT78 406 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 OR51V1Q9H2C8 321 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL4A2-209ENST00000494852 CENPMQ9NSP4 180 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 FOXJ3Q9UPW0 622 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 SIGLEC9Q9Y336 463 aa12.97□□□□□ -0.33
COL4A2-209ENST00000494852 A0A1B0GW55 424 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 MEIOCA2RUB1 952 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 ZNF878C9JN71 531 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 G3V2T6 193 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 NDUFB3O43676 98 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 DUX4L2P0CJ85 424 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 DUX4L3P0CJ86 424 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 DUX4L4P0CJ87 422 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 DUX4L5P0CJ88 424 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 DUX4L6P0CJ89 424 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 DUX4L7P0CJ90 424 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 ANOS1P23352 680 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 SAA4P35542 130 aa12.96□□□□□ -0.33
COL4A2-209ENST00000494852 EIF2B1Q14232 305 aaKnown RBP12.96□□□□□ -0.33
COL4A2-209ENST00000494852 TAF13Q15543 124 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms