RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 ZNF879B4DU55 563 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 ENTPD5O75356 428 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 GCGP01275 180 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 PSMC3P17980 439 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 HTR1DP28221 377 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 NDUFA8P51970 172 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 TAS2R46P59540 309 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 SLC35B1P78383 322 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 ATP6V1FQ16864 119 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 Q3ZCU0 254 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 CD300LGQ6UXG3 332 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 PID1Q7Z2X4 250 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 DEFB132Q7Z7B7 95 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 LRRC20Q8TCA0 184 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 C15orf40Q8WUR7 153 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 MAP1LC3CQ9BXW4 147 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 ZNF223Q9UK11 482 aaPredicted RBP3.97□□□□□ -1.77
SMC2-205ENST00000493955 CES1P1Q9UKY3 287 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 SLIT2O94813 1529 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 RREB1Q92766 1687 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 THSD7AQ9UPZ6 1657 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 PHRF1Q9P1Y6 1649 aaKnown RBP3.97□□□□□ -1.77
SMC2-205ENST00000493955 SBNO1A3KN83 1393 aa3.97□□□□□ -1.77
SMC2-205ENST00000493955 NACAE9PAV3 2078 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 A0A0B4J2E0 115 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 DFFAO00273 331 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 RFXANKO14593 260 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 RAD1O60671 282 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 CTNSO60931 367 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 SPAG7O75391 227 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 LCA5LO95447 670 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 ZNF823P16415 610 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 CCNOP22674 350 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 UBE2E1P51965 193 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 ATP5J2P56134 94 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 VAMP3Q15836 100 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 TMEM205Q6UW68 189 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 TMPRSS11AQ6ZMR5 421 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 ZNF786Q8N393 782 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 UBAC2Q8NBM4 344 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 OR5W2Q8NH69 310 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 OR10G6Q8NH81 332 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 PTX4Q96A99 478 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 PDXPQ96GD0 296 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 UBE2E2Q96LR5 201 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 TEAD3Q99594 435 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 HSD17B10Q99714 261 aaKnown RBP3.96□□□□□ -1.77
SMC2-205ENST00000493955 SLC17A9Q9BYT1 436 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 HMG20AQ9NP66 347 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 TBX21Q9UL17 535 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 ZNF257Q9Y2Q1 563 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 HYOU1Q9Y4L1 999 aa3.96□□□□□ -1.77
SMC2-205ENST00000493955 NAIPQ13075 1403 aa3.96□□□□□ -1.78
SMC2-205ENST00000493955 A0A1W2PP18 115 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 NEMFO60524 1076 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 GGT2P36268 569 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 TALDO1P37837 337 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 RPL18AQ02543 176 aaKnown RBP3.95□□□□□ -1.78
SMC2-205ENST00000493955 KDSRQ06136 332 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 RBMY1FQ15415 496 aaKnown RBP3.95□□□□□ -1.78
SMC2-205ENST00000493955 DEFB116Q30KQ4 102 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 IGFL2Q6UWQ7 119 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 SNX20Q7Z614 316 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 ST13P4Q8IZP2 240 aaPredicted RBP3.95□□□□□ -1.78
SMC2-205ENST00000493955 NDNFQ8TB73 568 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 CENPNQ96H22 339 aaPredicted RBP3.95□□□□□ -1.78
SMC2-205ENST00000493955 GLT1D1Q96MS3 346 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 PLA2G2FQ9BZM2 168 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 C12orf10Q9HB07 376 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 NUP214P35658 2090 aaPredicted RBP3.95□□□□□ -1.78
SMC2-205ENST00000493955 BLMP54132 1417 aaPredicted RBP3.95□□□□□ -1.78
SMC2-205ENST00000493955 IGLV4-69A0A075B6H9 119 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 TRAV19A0A0A6YYK7 116 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 SLC22A5O76082 557 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 APOA1P02647 267 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 CD70P32970 193 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 ARL2P36404 184 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 ESRRGP62508 458 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 RPL23P62829 140 aaKnown RBP3.95□□□□□ -1.78
SMC2-205ENST00000493955 STK11Q15831 433 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 UBE2SQ16763 222 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 KRT71Q3SY84 523 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 TFDP3Q5H9I0 405 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 FAM78AQ5JUQ0 283 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 CPTPQ5TA50 214 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 SH2D6Q7Z4S9 175 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 CALHM1Q8IU99 346 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 SLC30A8Q8IWU4 369 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 C19orf18Q8NEA5 215 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 COQ8AQ8NI60 647 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 CYYR1Q96J86 154 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 OSBPL11Q9BXB4 747 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 TOLLIPQ9H0E2 274 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 ANKHQ9HCJ1 492 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 FBXO8Q9NRD0 319 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 TREX1Q9NSU2 369 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 DDX19AQ9NUU7 478 aaKnown RBP3.95□□□□□ -1.78
SMC2-205ENST00000493955 GGA2Q9UJY4 613 aa3.95□□□□□ -1.78
SMC2-205ENST00000493955 ZNF222Q9UK12 451 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms