RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 FASP25445 335 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 POLR2IP36954 125 aaKnown RBP8.86□□□□□ -0.99
COL6A3-214ENST00000493608 GNALP38405 381 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 ESRRGP62508 458 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 MZT1Q08AG7 82 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 PRDX4Q13162 271 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 C12orf54Q6X4T0 127 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 KCTD8Q6ZWB6 473 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 RHOUQ7L0Q8 258 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 FAM90A1Q86YD7 464 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 FGFRL1Q8N441 504 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 OR1M1Q8NGA1 313 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 LRRC29Q8WV35 223 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 DNAJC9Q8WXX5 260 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 ZNF48Q96MX3 618 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-214ENST00000493608 IL4I1Q96RQ9 567 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 YIPF3Q9GZM5 350 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 MS4A7Q9GZW8 240 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-214ENST00000493608 H2AFY2Q9P0M6 372 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-214ENST00000493608 ERVK-18Q9QC07 812 aa8.86□□□□□ -0.99
COL6A3-214ENST00000493608 TRAV38-1A0A0B4J264 116 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 A0A1B0GW55 424 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 MEGF11A6BM72 1044 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 CDIPTO14735 213 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 PHYHO14832 338 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 TFF1P04155 84 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 SFTPBP07988 381 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 DUX4L2P0CJ85 424 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 DUX4L3P0CJ86 424 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 DUX4L4P0CJ87 422 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 DUX4L5P0CJ88 424 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 DUX4L6P0CJ89 424 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 DUX4L7P0CJ90 424 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 CFL1P23528 166 aaKnown RBP8.85□□□□□ -0.99
COL6A3-214ENST00000493608 CPT2P23786 658 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 FGF12P61328 243 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 LCN1P1Q5VSP4 162 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 SLX4IPQ5VYV7 408 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 KDM4DQ6B0I6 523 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 KCTD18Q6PI47 426 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-214ENST00000493608 DUX4L9Q6RFH8 374 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-214ENST00000493608 WDR82Q6UXN9 313 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 MEPCEQ7L2J0 689 aaKnown RBP8.85□□□□□ -0.99
COL6A3-214ENST00000493608 PARP8Q8N3A8 854 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 CSNK2A3Q8NEV1 391 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 OR5T2Q8NGG2 359 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 FAM216AQ8WUB2 273 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 ZFAND2BQ8WV99 257 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 RPL3LQ92901 407 aaKnown RBP8.85□□□□□ -0.99
COL6A3-214ENST00000493608 GCDHQ92947 438 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-214ENST00000493608 DACT3Q96B18 629 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-214ENST00000493608 RNF170Q96K19 258 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 JMJD8Q96S16 334 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 CCL13Q99616 98 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 APOL4Q9BPW4 351 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 MICU1Q9BPX6 476 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 KRTAP4-12Q9BQ66 201 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 FGF23Q9GZV9 251 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-214ENST00000493608 DUX4Q9UBX2 424 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
COL6A3-214ENST00000493608 TENM1Q9UKZ4 2725 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 TRAV40A0A0B4J280 105 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 MDFIC2A0A1B0GVS7 189 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 TMEM269A0A1B0GVZ9 245 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 SAC3D1A6NKF1 404 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 ANXA2P2A6NMY6 339 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 ZAR1LA6NP61 321 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 TMPRSS2O15393 492 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 CIB2O75838 187 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 CXCR4P61073 352 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 UBA52P62987 128 aaKnown RBP8.84□□□□□ -0.99
COL6A3-214ENST00000493608 EFNB1P98172 346 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 ANK2Q01484 3957 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 KCNJ8Q15842 424 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 AADACL4Q5VUY2 407 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 C12orf73Q69YU5 71 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 RBMS3Q6XE24 437 aaKnown RBP8.84□□□□□ -0.99
COL6A3-214ENST00000493608 BRD3OSQ6XYD6 125 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 PLEKHG7Q6ZR37 379 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 COMMD2Q86X83 199 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 SLC35F2Q8IXU6 374 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 GALNT4Q8N4A0 578 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 FAM81AQ8TBF8 368 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 TMEM163Q8TC26 289 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 OR51E1Q8TCB6 317 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 PYDC1Q8WXC3 89 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 OR5P3Q8WZ94 311 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 ST8SIA4Q92187 359 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 TAF15Q92804 592 aaKnown RBP eCLIP8.84□□□□□ -0.99
COL6A3-214ENST00000493608 UPRTQ96BW1 309 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 FAM71F1Q96KD3 344 aaPredicted RBP8.84□□□□□ -0.99
COL6A3-214ENST00000493608 C1orf147Q96MC9 270 aaPredicted RBP8.84□□□□□ -0.99
COL6A3-214ENST00000493608 OR8B4Q96RC9 309 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 TBX5Q99593 518 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 CIB1Q99828 191 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 PKP2Q99959 881 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 PCGF1Q9BSM1 259 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 MROQ9BYG7 248 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 PBOV1Q9GZY1 135 aa8.84□□□□□ -0.99
COL6A3-214ENST00000493608 WDR13Q9H1Z4 485 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms