RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TFPTP0C1Z6 253 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 CECR9P0C854 216 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 NCF2P19878 526 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 PRPS1L1P21108 318 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ZBTB25P24278 435 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 IGFBP5P24593 272 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 MC5RP33032 325 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 GCKP35557 465 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ALDH3B1P43353 468 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 POLR2JP52435 117 aaKnown RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 CAPZA1P52907 286 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 RIPPLY3P57055 190 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 RGS8P57771 180 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 HPCAP84074 193 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 DHODHQ02127 395 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 PRB3Q04118 309 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 LRRC74AQ0VAA2 488 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 PPP1R8Q12972 351 aaKnown RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 BIKQ13323 160 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 GGTLC2Q14390 218 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 PPA1Q15181 289 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SNAPC1Q16533 368 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 MEP1BQ16820 701 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 DUSP7Q16829 419 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 CLEC12BQ2HXU8 276 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 CEACAM16Q2WEN9 425 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF311Q5JNZ3 666 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SPATA46Q5T0L3 261 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 AVPI1Q5T686 147 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 PRAMEF8Q5VWM4 474 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 PRAMEF7Q5VXH5 474 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 REP15Q6BDI9 236 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 C11orf71Q6IPW1 123 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 TEX38Q6PEX7 206 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 EPGNQ6UW88 154 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 DLEU7Q6UYE1 221 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 RNF165Q6ZSG1 346 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 TMPPEQ6ZT21 453 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 Q6ZVH6 145 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 GRINAQ7Z429 371 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SPATA19Q7Z5L4 167 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 VTCN1Q7Z7D3 282 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 DHDDSQ86SQ9 333 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 MDP1Q86V88 176 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 LCA5Q86VQ0 697 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 NKAIN4Q8IVV8 208 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SVOPLQ8N434 492 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 C19orf18Q8NEA5 215 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 OR8J2Q8NGG1 315 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 OR6T1Q8NGN1 323 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 OR10S1Q8NGN2 331 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 OR1K1Q8NGR3 316 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 RHOXF1Q8NHV9 184 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SLC7A6Q92536 515 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 GTF2H4Q92759 462 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 APH1AQ96BI3 265 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 TESCQ96BS2 214 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SPDL1Q96EA4 605 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ATP6V1G3Q96LB4 118 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 FAM218AQ96MZ4 157 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 LINC00167Q96N53 147 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 MS4A10Q96PG2 267 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 CDRT15Q96T59 188 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 PRSS27Q9BQR3 290 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 POTEKPQ9BYX7 375 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ROPN1BQ9BZX4 212 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 NMUR2Q9GZQ4 415 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SLITRK2Q9H156 845 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 WNT5BQ9H1J7 359 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 MMADHCQ9H3L0 296 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 FN3KQ9H479 309 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ROPN1Q9HAT0 212 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 EML4Q9HC35 981 aaKnown RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 Q9N2K0 584 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SDHAF3Q9NRP4 125 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 TNFRSF19Q9NS68 423 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 FGFR1OP2Q9NVK5 253 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 HAO2Q9NYQ3 351 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 BTNL2Q9UIR0 455 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 MCTS1Q9ULC4 181 aaKnown RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF256Q9Y2P7 627 aaPredicted RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 NOSIPQ9Y314 301 aaKnown RBP2.36□□□□□ -2.03
PTCD3-218ENST00000493430 SLC25A15Q9Y619 301 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 KIF25-AS1Q9Y6Z4 181 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 TENM1Q9UKZ4 2725 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 COL6A5A8TX70 2615 aa2.36□□□□□ -2.03
PTCD3-218ENST00000493430 NIPBLQ6KC79 2804 aaeCLIP2.35□□□□□ -2.03
PTCD3-218ENST00000493430 ATRQ13535 2644 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 TRAV27A0A087WT01 109 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 A0A087WZY1 265 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 A0A096LPI6 279 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 TMEM129A0AVI4 362 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 A4D1N5 150 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 HTR3EA5X5Y0 456 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 CFAP73A6NFT4 308 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 OR5H1A6NKK0 313 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 K7EQD1 137 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 NME4O00746 187 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 UBDO15205 165 aa2.35□□□□□ -2.03
PTCD3-218ENST00000493430 POLR3GO15318 223 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms