RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 DISC1C4P0D8 188 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 KLRC4-KLRK1H3BQV0 150 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 H3BUI4 141 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 CDC14BO60729 498 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 TRAPPC6AO75865 159 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 TPOP07202 933 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 SP1P08047 785 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 MMP7P09237 267 aaPredicted RBP9.38□□□□□ -0.91
USP4-214ENST00000491791 COX5BP10606 129 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 HLA-GP17693 338 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 PTGFRP43088 359 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 TMEM50BP56557 158 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 RPS27AP62979 156 aaKnown RBP9.38□□□□□ -0.91
USP4-214ENST00000491791 GK2Q14410 553 aaPredicted RBP9.38□□□□□ -0.91
USP4-214ENST00000491791 KISS1Q15726 138 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 ACTBL2Q562R1 376 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 AWAT2Q6E213 333 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 TMEM53Q6P2H8 277 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 GLIPR1L1Q6UWM5 242 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 COLCA1Q6ZS62 124 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 NLRC3Q7RTR2 1065 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 FJX1Q86VR8 437 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 ZDHHC22Q8N966 263 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 PNLDC1Q8NA58 520 aaKnown RBP9.38□□□□□ -0.91
USP4-214ENST00000491791 STEAP2Q8NFT2 490 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 BEST4Q8NFU0 473 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 OR11H4Q8NGC9 324 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 LILRB4Q8NHJ6 448 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 ZNF431Q8TF32 576 aaPredicted RBP9.38□□□□□ -0.91
USP4-214ENST00000491791 ROBO4Q8WZ75 1007 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 HAS2Q92819 552 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 CPNE2Q96FN4 548 aaPredicted RBP9.38□□□□□ -0.91
USP4-214ENST00000491791 FAM71F1Q96KD3 344 aaPredicted RBP9.38□□□□□ -0.91
USP4-214ENST00000491791 TECTBQ96PL2 329 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 FOXB1Q99853 325 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 URM1Q9BTM9 101 aaKnown RBP9.38□□□□□ -0.91
USP4-214ENST00000491791 TTTY12Q9BZ98 90 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 CST11Q9H112 138 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 EXO5Q9H790 373 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 CRLF2Q9HC73 371 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 PLEK2Q9NYT0 353 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 MGAT4CQ9UBM8 478 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 ZNF222Q9UK12 451 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 MGAT4AQ9UM21 535 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 PLEKHA6Q9Y2H5 1048 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 ATMQ13315 3056 aa9.38□□□□□ -0.91
USP4-214ENST00000491791 A0A0A6YYD4 124 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 C5orf63A6NC05 138 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 TMEM235A6NFC5 223 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 HMSDA8MTL9 139 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 F5H5K5 113 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 MFNGO00587 321 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 SSX5O60225 188 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 SLC2A1P11166 492 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 HIST1H1DP16402 221 aaKnown RBP9.37□□□□□ -0.91
USP4-214ENST00000491791 ANXA7P20073 488 aaKnown RBP9.37□□□□□ -0.91
USP4-214ENST00000491791 DNASE1P24855 282 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 STARP49675 285 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 UBE2MP61081 183 aaKnown RBP9.37□□□□□ -0.91
USP4-214ENST00000491791 PSG4Q00888 419 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 RNPS1Q15287 305 aaKnown RBP9.37□□□□□ -0.91
USP4-214ENST00000491791 UBE2V2Q15819 145 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 GFOD2Q3B7J2 385 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 VAX1Q5SQQ9 334 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 FAAP20Q6NZ36 180 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 IDO2Q6ZQW0 420 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 DPPA2Q7Z7J5 298 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 ZNF584Q8IVC4 421 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 GALNT16Q8N428 558 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 LRRC18Q8N456 261 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 TMEM251Q8N6I4 163 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 SEC22CQ9BRL7 303 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 TMEM59Q9BXS4 323 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 OR2H1Q9GZK4 316 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 PRDM14Q9GZV8 571 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 WNT5BQ9H1J7 359 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 HEXA-AS1Q9H8Q6 139 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 IL17BQ9UHF5 180 aa9.37□□□□□ -0.91
USP4-214ENST00000491791 ELF5Q9UKW6 265 aaPredicted RBP9.37□□□□□ -0.91
USP4-214ENST00000491791 TENM4Q6N022 2769 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 PLSCR5A0PG75 271 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 AKR7A2O43488 359 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 FARS2O95363 451 aaKnown RBP9.36□□□□□ -0.91
USP4-214ENST00000491791 IL2RAP01589 272 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 HCKP08631 526 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 ZNF32P17041 273 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 C4BPBP20851 252 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 PRKACBP22694 351 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 ITGA3P26006 1051 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 OR3A4PP47883 348 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 RRADP55042 308 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 OR8B8Q15620 311 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 CEACAM16Q2WEN9 425 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 PLAC9Q5JTB6 97 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 PCSK4Q6UW60 755 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 TRAPPC6BQ86SZ2 158 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 SLC25A42Q86VD7 318 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 SKA3Q8IX90 412 aa9.36□□□□□ -0.91
USP4-214ENST00000491791 BPIFB2Q8N4F0 458 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms