RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 HPSE2Q8WWQ2 592 aa16.43■□□□□ 0.22
SMC4-222ENST00000490207 OR5P3Q8WZ94 311 aa16.43■□□□□ 0.22
SMC4-222ENST00000490207 UPRTQ96BW1 309 aa16.43■□□□□ 0.22
SMC4-222ENST00000490207 RBM4BQ9BQ04 359 aaKnown RBP16.43■□□□□ 0.22
SMC4-222ENST00000490207 OSBPL10Q9BXB5 764 aa16.43■□□□□ 0.22
SMC4-222ENST00000490207 HAO2Q9NYQ3 351 aa16.43■□□□□ 0.22
SMC4-222ENST00000490207 ZNF69Q9UC07 566 aa16.43■□□□□ 0.22
SMC4-222ENST00000490207 TRAV40A0A0B4J280 105 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 ZNF816-ZNF321PA0A0X1KG74 233 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 CDIPTO14735 213 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 TNFRSF13BO14836 293 aaPredicted RBP16.42■□□□□ 0.22
SMC4-222ENST00000490207 IGHV4-38-2P0DP08 117 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 POLR2IP36954 125 aaKnown RBP16.42■□□□□ 0.22
SMC4-222ENST00000490207 ACTR3P61158 418 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 ACTG1P63261 375 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 KPNB1Q14974 876 aaKnown RBP16.42■□□□□ 0.22
SMC4-222ENST00000490207 KCTD8Q6ZWB6 473 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 SIGLECL1Q8N7X8 197 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 OR51G2Q8NGK0 314 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 FAM71F1Q96KD3 344 aaPredicted RBP16.42■□□□□ 0.22
SMC4-222ENST00000490207 FGF23Q9GZV9 251 aaPredicted RBP16.42■□□□□ 0.22
SMC4-222ENST00000490207 MOB1AQ9H8S9 216 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 SMURF1Q9HCE7 757 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 ESM1Q9NQ30 184 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 GPR84Q9NQS5 396 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 CLN6Q9NWW5 311 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 NUFIP1Q9UHK0 495 aaKnown RBP16.42■□□□□ 0.22
SMC4-222ENST00000490207 GTF2A1LQ9UNN4 478 aa16.42■□□□□ 0.22
SMC4-222ENST00000490207 IGHV3OR16-10A0A075B7F0 116 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 SRRM5B3KS81 715 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 LOC110117498-PIK3R3F6TDL0 507 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 IGLV3-1P01715 115 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 ATP6V1B1P15313 513 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 MUC1P15941 1255 aaPredicted RBP16.41■□□□□ 0.22
SMC4-222ENST00000490207 POU4F2Q12837 409 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 MICBQ29980 383 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 CD276Q5ZPR3 534 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 RBMS3Q6XE24 437 aaKnown RBP16.41■□□□□ 0.22
SMC4-222ENST00000490207 ZDHHC22Q8N966 263 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 OR10Z1Q8NGY1 313 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 OR51E1Q8TCB6 317 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 RPL3LQ92901 407 aaKnown RBP16.41■□□□□ 0.22
SMC4-222ENST00000490207 ITFG2Q969R8 447 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 RNF170Q96K19 258 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 APOL4Q9BPW4 351 aa16.41■□□□□ 0.22
SMC4-222ENST00000490207 MS4A7Q9GZW8 240 aaPredicted RBP16.41■□□□□ 0.22
SMC4-222ENST00000490207 WARS2Q9UGM6 360 aaKnown RBP16.41■□□□□ 0.22
SMC4-222ENST00000490207 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.4■□□□□ 0.22
SMC4-222ENST00000490207 TMPRSS2O15393 492 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 SRSF10O75494 262 aaKnown RBP16.4■□□□□ 0.22
SMC4-222ENST00000490207 CFHR2P36980 270 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 FGF12P61328 243 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 EGR3Q06889 387 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 TUSC1Q2TAM9 212 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 ZFP1Q6P2D0 407 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 PLEKHG7Q6ZR37 379 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 DOK3Q7L591 496 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 THAP5Q7Z6K1 395 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 BCL6BQ8N143 479 aaPredicted RBP16.4■□□□□ 0.22
SMC4-222ENST00000490207 FAM216AQ8WUB2 273 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 HIST1H2AAQ96QV6 131 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 KAAG1Q9UBP8 84 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 R4GMQ9 66 aa16.4■□□□□ 0.22
SMC4-222ENST00000490207 H3BNX3 289 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 DVL1O14640 695 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 MAGEB4O15481 346 aaPredicted RBP16.39■□□□□ 0.21
SMC4-222ENST00000490207 DHRS3O75911 302 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 PLATP00750 562 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 TTRP02766 147 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 HTR1FP30939 366 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 GPM6AP51674 278 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 CDC42P60953 191 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 GMFBP60983 142 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 UBA52P62987 128 aaKnown RBP16.39■□□□□ 0.21
SMC4-222ENST00000490207 RIPPLY1Q0D2K3 151 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 WDR38Q5JTN6 314 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 CEP78Q5JTW2 689 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 BCL2L15Q5TBC7 163 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 ZBTB37Q5TC79 503 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 SCCPDHQ8NBX0 429 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 OR8J1Q8NGP2 316 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 ST8SIA4Q92187 359 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 PPP1R14AQ96A00 147 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 C12orf43Q96C57 262 aaKnown RBP16.39■□□□□ 0.21
SMC4-222ENST00000490207 TBX5Q99593 518 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 CCL13Q99616 98 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 RASSF4Q9H2L5 321 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 MRM2Q9UI43 246 aaKnown RBP16.39■□□□□ 0.21
SMC4-222ENST00000490207 ENPP5Q9UJA9 477 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 OR52A1Q9UKL2 312 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 PIGLQ9Y2B2 252 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 ORC6Q9Y5N6 252 aa16.39■□□□□ 0.21
SMC4-222ENST00000490207 A0A1B0GW55 424 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 EI24O14681 340 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 FCN3O75636 299 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 APOL3O95236 402 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 DUX4L2P0CJ85 424 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 DUX4L3P0CJ86 424 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 DUX4L4P0CJ87 422 aa16.38■□□□□ 0.21
SMC4-222ENST00000490207 DUX4L5P0CJ88 424 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms