RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TMEM269A0A1B0GVZ9 245 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 SAC3D1A6NKF1 404 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 ANXA2P2A6NMY6 339 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 ZAR1LA6NP61 321 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 DVL1O14640 695 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 PLATP00750 562 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 POLR2IP36954 125 aaKnown RBP11.62□□□□□ -0.55
VTI1A-206ENST00000489142 NPY4RP50391 375 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 TUSC1Q2TAM9 212 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 WDR38Q5JTN6 314 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 CEP78Q5JTW2 689 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 SLX4IPQ5VYV7 408 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 TEX36Q5VZQ5 186 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 C12orf73Q69YU5 71 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 KDM4DQ6B0I6 523 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 MEPCEQ7L2J0 689 aaKnown RBP11.62□□□□□ -0.55
VTI1A-206ENST00000489142 FAM216BQ8N7L0 139 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 FAM81AQ8TBF8 368 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 TMEM163Q8TC26 289 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 OR51E1Q8TCB6 317 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 OR5P3Q8WZ94 311 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 RNF170Q96K19 258 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 OR8B4Q96RC9 309 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 CIB1Q99828 191 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 APOL4Q9BPW4 351 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 PBOV1Q9GZY1 135 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 GABARAPL1Q9H0R8 117 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 ADGRL4Q9HBW9 690 aa11.62□□□□□ -0.55
VTI1A-206ENST00000489142 TMEM89A2RUT3 159 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 AKR7A2O43488 359 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 ATP5HO75947 161 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 APOL3O95236 402 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 CST4P01036 141 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 PPIAL4GP0DN37 164 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 SELLP14151 372 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 CFHR2P36980 270 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 GPM6AP51674 278 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 CXCR4P61073 352 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 IL5RAQ01344 420 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 IKZF1Q13422 519 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 MICBQ29980 383 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 KCTD18Q6PI47 426 aaPredicted RBP11.61□□□□□ -0.55
VTI1A-206ENST00000489142 BTN2A1Q7KYR7 527 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 ZDHHC13Q8IUH4 622 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 SLC35F2Q8IXU6 374 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 ZDHHC23Q8IYP9 409 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 GALNT4Q8N4A0 578 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 FTMTQ8N4E7 242 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 SCCPDHQ8NBX0 429 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 TBX5Q99593 518 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 MROQ9BYG7 248 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 PRRG3Q9BZD7 231 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 TLNRD1Q9H1K6 362 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 RIBC2Q9H4K1 309 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 RNPEPL1Q9HAU8 725 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 TRIM36Q9NQ86 728 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 GPR84Q9NQS5 396 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 TNFRSF19Q9NS68 423 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 OAZ3Q9UMX2 235 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 MPC1Q9Y5U8 109 aa11.61□□□□□ -0.55
VTI1A-206ENST00000489142 ZNF879B4DU55 563 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 RHBDL1O75783 438 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 CIB2O75838 187 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 TOX4O94842 621 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 FAHP16930 419 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 PRTN3P24158 256 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 RIDAP52758 137 aaKnown RBP11.6□□□□□ -0.55
VTI1A-206ENST00000489142 EFNB1P98172 346 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 ROM1Q03395 351 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 PRB3Q04118 309 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-206ENST00000489142 SLC9A3R2Q15599 337 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 DEFB112Q30KQ8 113 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 AWAT1Q58HT5 328 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 GPR157Q5UAW9 335 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 AADACL4Q5VUY2 407 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 NXNL2Q5VZ03 156 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 CD276Q5ZPR3 534 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 ZNF322Q6U7Q0 402 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-206ENST00000489142 SSX6Q7RTT6 188 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 PDZD9Q8IXQ8 264 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 ZNF679Q8IYX0 411 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 C3orf56Q8N813 242 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 OR51G2Q8NGK0 314 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 PYDC1Q8WXC3 89 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 DUS3LQ96G46 650 aaKnown RBP11.6□□□□□ -0.55
VTI1A-206ENST00000489142 TBX15Q96SF7 602 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 H2AFY2Q9P0M6 372 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-206ENST00000489142 DNAJB11Q9UBS4 358 aa11.6□□□□□ -0.55
VTI1A-206ENST00000489142 A0A0U1RQV5 110 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 ZNF816-ZNF321PA0A0X1KG74 233 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 A6NIN4 97 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 SRRM5B3KS81 715 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 H3BSH0 61 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 NDUFA2O43678 99 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 SRSF10O75494 262 aaKnown RBP11.59□□□□□ -0.55
VTI1A-206ENST00000489142 FCGR1AP12314 374 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 MMP9P14780 707 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 MUC1P15941 1255 aaPredicted RBP11.59□□□□□ -0.55
VTI1A-206ENST00000489142 AMY2BP19961 511 aa11.59□□□□□ -0.55
VTI1A-206ENST00000489142 MAP2K3P46734 347 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms