RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PKP2Q99959 881 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 APOL4Q9BPW4 351 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 RTL8AQ9BWD3 113 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 OSBPL10Q9BXB5 764 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 GABARAPL3Q9BY60 117 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 PBOV1Q9GZY1 135 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 RASSF4Q9H2L5 321 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 ERVK-18Q9QC07 812 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 IKZF2Q9UKS7 526 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 IGHV3OR16-10A0A075B7F0 116 aa20.75■□□□□ 0.91
HMGN1-217ENST00000489072 NDUFA2O43678 99 aa20.75■□□□□ 0.91
HMGN1-217ENST00000489072 SRSF10O75494 262 aaKnown RBP20.75■□□□□ 0.91
HMGN1-217ENST00000489072 IGLV3-1P01715 115 aa20.75■□□□□ 0.91
HMGN1-217ENST00000489072 RIDAP52758 137 aaKnown RBP20.75■□□□□ 0.91
HMGN1-217ENST00000489072 CXCR4P61073 352 aa20.75■□□□□ 0.91
HMGN1-217ENST00000489072 ZNF322Q6U7Q0 402 aaPredicted RBP20.75■□□□□ 0.91
HMGN1-217ENST00000489072 RIBC2Q9H4K1 309 aa20.75■□□□□ 0.91
HMGN1-217ENST00000489072 HAO2Q9NYQ3 351 aa20.75■□□□□ 0.91
HMGN1-217ENST00000489072 TRIM77I1YAP6 450 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 CFHR2P36980 270 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 ACTR3P61158 418 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 KPNB1Q14974 876 aaKnown RBP20.74■□□□□ 0.91
HMGN1-217ENST00000489072 ZNF829Q3KNS6 432 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-217ENST00000489072 KRT74Q7RTS7 529 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 GID4Q8IVV7 300 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 ZDHHC23Q8IYP9 409 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 FAM81AQ8TBF8 368 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 OR51E1Q8TCB6 317 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 FAM216AQ8WUB2 273 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 RPL3LQ92901 407 aaKnown RBP20.74■□□□□ 0.91
HMGN1-217ENST00000489072 ZNF48Q96MX3 618 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-217ENST00000489072 ABCB9Q9NP78 766 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 GPR84Q9NQS5 396 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 CLN6Q9NWW5 311 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 KAAG1Q9UBP8 84 aa20.74■□□□□ 0.91
HMGN1-217ENST00000489072 NUFIP1Q9UHK0 495 aaKnown RBP20.74■□□□□ 0.91
HMGN1-217ENST00000489072 SOX21Q9Y651 276 aaPredicted RBP20.74■□□□□ 0.91
HMGN1-217ENST00000489072 ZNF816-ZNF321PA0A0X1KG74 233 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 A0A1B0GW55 424 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 SRRM5B3KS81 715 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 H3BNX3 289 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 ENSAO43768 121 aaKnown RBP20.73■□□□□ 0.91
HMGN1-217ENST00000489072 DUX4L2P0CJ85 424 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 DUX4L3P0CJ86 424 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 DUX4L4P0CJ87 422 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 DUX4L5P0CJ88 424 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 DUX4L6P0CJ89 424 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 DUX4L7P0CJ90 424 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 MAP2K3P46734 347 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 FGF12P61328 243 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 FAM76BQ5HYJ3 339 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 DUX4L9Q6RFH8 374 aaPredicted RBP20.73■□□□□ 0.91
HMGN1-217ENST00000489072 CCDC121Q6ZUS5 278 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 DOK3Q7L591 496 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 OR51G2Q8NGK0 314 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 RNF170Q96K19 258 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 FAM71F1Q96KD3 344 aaPredicted RBP20.73■□□□□ 0.91
HMGN1-217ENST00000489072 MNTQ99583 582 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 DUX4Q9UBX2 424 aa20.73■□□□□ 0.91
HMGN1-217ENST00000489072 TRAV40A0A0B4J280 105 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 TMEM210A6NLX4 147 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 DVL1O14640 695 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 PLATP00750 562 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 TTRP02766 147 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 MUC1P15941 1255 aaPredicted RBP20.72■□□□□ 0.91
HMGN1-217ENST00000489072 MICBQ29980 383 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 WDR38Q5JTN6 314 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 CD276Q5ZPR3 534 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 PLEKHG7Q6ZR37 379 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 SSX6Q7RTT6 188 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 COMMD2Q86X83 199 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 FGFRL1Q8N441 504 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 SCCPDHQ8NBX0 429 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 CCL13Q99616 98 aa20.72■□□□□ 0.91
HMGN1-217ENST00000489072 RBM4BQ9BQ04 359 aaKnown RBP20.72■□□□□ 0.91
HMGN1-217ENST00000489072 WARS2Q9UGM6 360 aaKnown RBP20.72■□□□□ 0.91
HMGN1-217ENST00000489072 MRM2Q9UI43 246 aaKnown RBP20.72■□□□□ 0.91
HMGN1-217ENST00000489072 ZNF670-ZNF695F2Z2N8 137 aa20.71■□□□□ 0.91
HMGN1-217ENST00000489072 TMPRSS2O15393 492 aa20.71■□□□□ 0.91
HMGN1-217ENST00000489072 GPM6AP51674 278 aa20.71■□□□□ 0.91
HMGN1-217ENST00000489072 UBA52P62987 128 aaKnown RBP20.71■□□□□ 0.91
HMGN1-217ENST00000489072 DMRTC1Q5HYR2 192 aa20.71■□□□□ 0.91
HMGN1-217ENST00000489072 KCTD8Q6ZWB6 473 aa20.71■□□□□ 0.91
HMGN1-217ENST00000489072 MS4A7Q9GZW8 240 aaPredicted RBP20.71■□□□□ 0.91
HMGN1-217ENST00000489072 WDR13Q9H1Z4 485 aa20.71■□□□□ 0.91
HMGN1-217ENST00000489072 APOL3O95236 402 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 ATP6V1B1P15313 513 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 FAHP16930 419 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 AMY2BP19961 511 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 HTR1FP30939 366 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 GMFBP60983 142 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 ACTG1P63261 375 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 CEP78Q5JTW2 689 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 C9orf139Q6ZV77 190 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 OR10Z1Q8NGY1 313 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 C1orf147Q96MC9 270 aaPredicted RBP20.7■□□□□ 0.9
HMGN1-217ENST00000489072 TBX5Q99593 518 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 GTF2A1LQ9UNN4 478 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 R4GMQ9 66 aa20.7■□□□□ 0.9
HMGN1-217ENST00000489072 LOC110117498-PIK3R3F6TDL0 507 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms