RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MRM2Q9UI43 246 aaKnown RBP11.96□□□□□ -0.49
BRCA1-218ENST00000489037 ENPP5Q9UJA9 477 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 POLR3KQ9Y2Y1 108 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-218ENST00000489037 LOC100130705A0A1B0GUX0 176 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 C3orf80F5H4A9 247 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 MAGEB4O15481 346 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-218ENST00000489037 PHF1O43189 567 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-218ENST00000489037 DHRS3O75911 302 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 TTRP02766 147 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 CD80P33681 288 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 PITPNBP48739 271 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 NPY4RP50391 375 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 SEC61A1P61619 476 aaKnown RBP11.95□□□□□ -0.5
BRCA1-218ENST00000489037 MFGE8Q08431 387 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-218ENST00000489037 ZNF154Q13106 437 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 LIPNQ5VXI9 398 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 MOB3CQ70IA8 216 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 ELMOD2Q8IZ81 293 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 C19orf18Q8NEA5 215 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 LRRC29Q8WV35 223 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 OR5P3Q8WZ94 311 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 ITPKCQ96DU7 683 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 RNFT2Q96EX2 444 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 RDH12Q96NR8 316 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 MBOAT4Q96T53 435 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 TMPRSS13Q9BYE2 586 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 OCEL1Q9H607 264 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 ERVK-18Q9QC07 812 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 PIGLQ9Y2B2 252 aa11.95□□□□□ -0.5
BRCA1-218ENST00000489037 LOC105371242A0A075B767 164 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 A0A1B0GVI7 797 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 DAPL1A0PJW8 107 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 CDIPTO14735 213 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 ADAM20O43506 726 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 ZNF12P17014 697 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 GNG3P63215 75 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 MICBQ29980 383 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 ZNF684Q5T5D7 378 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 CD276Q5ZPR3 534 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 PLCXD3Q63HM9 321 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 DOK3Q7L591 496 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 SSX6Q7RTT6 188 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 C1QL2Q7Z5L3 287 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 KCTD20Q7Z5Y7 419 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 GCSAMQ8N6F7 178 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 TMEM158Q8WZ71 300 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 PPP1R14AQ96A00 147 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 TECTBQ96PL2 329 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 C8orf4Q9NR00 106 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 FAM118AQ9NWS6 357 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 SMPD3Q9NY59 655 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-218ENST00000489037 GNG8Q9UK08 70 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 AUP1Q9Y679 476 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 ATRQ13535 2644 aa11.94□□□□□ -0.5
BRCA1-218ENST00000489037 OR5B21A6NL26 309 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 RNF212BA8MTL3 300 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 ZNF732B4DXR9 585 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 TRAPPC2LH3BP13 241 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 P2RY10O00398 339 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 TCF21O43680 179 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 SRSF10O75494 262 aaKnown RBP11.93□□□□□ -0.5
BRCA1-218ENST00000489037 NRASP01111 189 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 LHBP01229 141 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 IGLV3-1P01715 115 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 MUC1P15941 1255 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-218ENST00000489037 GPM6AP51674 278 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 CSNK2BP67870 215 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 LYPD2Q6UXB3 125 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 WDR82Q6UXN9 313 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 WDR86Q86TI4 376 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 C11orf53Q8IXP5 236 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 CCDC54Q8NEL0 328 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 OR5A2Q8NGI9 324 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 OR10Z1Q8NGY1 313 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 RAB40AQ8WXH6 277 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 TLNRD1Q9H1K6 362 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 PPP1R3EQ9H7J1 279 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 PLEKHA1Q9HB21 404 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 MMP26Q9NRE1 261 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 INSIG2Q9Y5U4 225 aa11.93□□□□□ -0.5
BRCA1-218ENST00000489037 DHRS7CA6NNS2 312 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 E9PQ18 207 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 SLC16A6O15403 523 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 SYT7O43581 403 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 AVPP01185 164 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 GYPAP02724 150 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 FAHP16930 419 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 FPR2P25090 351 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 CFHR2P36980 270 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 PSMB10P40306 273 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 ZNF85Q03923 595 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 RCN1Q15293 331 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 ODF4Q2M2E3 257 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 TP53I3Q53FA7 332 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 ARMCX4Q5H9R4 360 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 CEP78Q5JTW2 689 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 CLVS2Q5SYC1 327 aa11.92□□□□□ -0.5
BRCA1-218ENST00000489037 TEX36Q5VZQ5 186 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms