RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ZNF799Q96GE5 643 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 ZNF582Q96NG8 517 aaPredicted RBP4.93□□□□□ -1.62
CDHR3-213ENST00000488386 FEVQ99581 238 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 SLC30A2Q9BRI3 323 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 COPS4Q9BT78 406 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 WACQ9BTA9 647 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 RBM4Q9BWF3 364 aaKnown RBP4.93□□□□□ -1.62
CDHR3-213ENST00000488386 CHID1Q9BWS9 393 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 TTTY10Q9BZA0 68 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 TRIM15Q9C019 465 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 PATZ1Q9HBE1 687 aaKnown RBP4.93□□□□□ -1.62
CDHR3-213ENST00000488386 ESM1Q9NQ30 184 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 NDE1Q9NXR1 346 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 IL20Q9NYY1 176 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 PDP1Q9P0J1 537 aaPredicted RBP4.93□□□□□ -1.62
CDHR3-213ENST00000488386 IL19Q9UHD0 177 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 KCNG2Q9UJ96 466 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 PPIAL4AQ9Y536 164 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 COL6A5A8TX70 2615 aa4.93□□□□□ -1.62
CDHR3-213ENST00000488386 IGHV3OR15-7A0A075B7D8 119 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 MDFIC2A0A1B0GVS7 189 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 A0A1B0GW55 424 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 GGT3PA6NGU5 568 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 LINC00473A8K010 186 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 H3BN98 237 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 H3BSA7 217 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 M0R129 80 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 PSMD9O00233 223 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ZNF593O00488 134 aaPredicted RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 SELENOFO60613 162 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 KRT36O76013 467 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 CST1P01037 141 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 TFF1P04155 84 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ANXA2P07355 339 aaKnown RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DUX4L2P0CJ85 424 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DUX4L3P0CJ86 424 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DUX4L4P0CJ87 422 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DUX4L5P0CJ88 424 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DUX4L6P0CJ89 424 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DUX4L7P0CJ90 424 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 IGHV4-38-2P0DP08 117 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 RPS2P15880 293 aaKnown RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 EGR1P18146 543 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 PPIFP30405 207 aaKnown RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 NAA10P41227 235 aaPredicted RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 RGS6P49758 472 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ENTPD1P49961 510 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 HCCSP53701 268 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 TPTEP56180 551 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 GMFBP60983 142 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 SLC3A1Q07837 685 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 RAB32Q13637 225 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 TAF13Q15543 124 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 FAM98BQ52LJ0 330 aaKnown RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 PLA1AQ53H76 456 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DMRTC1Q5HYR2 192 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 KLF17Q5JT82 389 aaPredicted RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 LINC01590Q5TEZ4 76 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 LIPNQ5VXI9 398 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 PLBD1Q6P4A8 553 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DUX4L9Q6RFH8 374 aaPredicted RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 COLCA1Q6ZS62 124 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 PGAP1Q75T13 922 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 MRPL21Q7Z2W9 205 aaKnown RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DPY19L4Q7Z388 723 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 C1QL2Q7Z5L3 287 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 SPATA24Q86W54 205 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 LRRC28Q86X40 367 aaPredicted RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ERI1Q8IV48 349 aaKnown RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 BBS1Q8NFJ9 593 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 OR2T33Q8NG76 320 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 OR56B2PQ8NGI1 322 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 OR5L1Q8NGL2 311 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 OR13G1Q8NGZ3 307 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 OR2T4Q8NH00 348 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 TEX47Q8TBZ9 253 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 GIPC3Q8TF64 312 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 SPRYD4Q8WW59 207 aaPredicted RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ASB9Q96DX5 294 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ZMYND19Q96E35 227 aaPredicted RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 SEH1LQ96EE3 360 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ZNF48Q96MX3 618 aaPredicted RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 TMEM246Q9BRR3 403 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ADAT1Q9BUB4 502 aaKnown RBP4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DGCR6LQ9BY27 220 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 NMNAT2Q9BZQ4 307 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 OR51V1Q9H2C8 321 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 MAGIXQ9H6Y5 334 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 TMEM165Q9HC07 324 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 TMEM100Q9NV29 134 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ZNF319Q9P2F9 582 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 DUX4Q9UBX2 424 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 ZNF69Q9UC07 566 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 KLHDC2Q9Y2U9 406 aa4.92□□□□□ -1.62
CDHR3-213ENST00000488386 MXRA5Q9NR99 2828 aa4.91□□□□□ -1.62
CDHR3-213ENST00000488386 PPIAL4EA0A075B759 164 aa4.91□□□□□ -1.62
CDHR3-213ENST00000488386 DHRS12A0PJE2 317 aa4.91□□□□□ -1.62
CDHR3-213ENST00000488386 CD300LBA8K4G0 201 aa4.91□□□□□ -1.62
CDHR3-213ENST00000488386 F5H0A9 414 aaPredicted RBP4.91□□□□□ -1.62
CDHR3-213ENST00000488386 PPIAL4DF5H284 164 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms