RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 PDCD1LG2Q9BQ51 273 aa9.06□□□□□ -0.96
TOP3B-216ENST00000487485 EGLN1Q9GZT9 426 aa9.06□□□□□ -0.96
TOP3B-216ENST00000487485 SLC22A4Q9H015 551 aa9.06□□□□□ -0.96
TOP3B-216ENST00000487485 COMMD4Q9H0A8 199 aa9.06□□□□□ -0.96
TOP3B-216ENST00000487485 PPP1R3EQ9H7J1 279 aa9.06□□□□□ -0.96
TOP3B-216ENST00000487485 BARX1Q9HBU1 254 aaPredicted RBP9.06□□□□□ -0.96
TOP3B-216ENST00000487485 IL19Q9UHD0 177 aa9.06□□□□□ -0.96
TOP3B-216ENST00000487485 PIGLQ9Y2B2 252 aa9.06□□□□□ -0.96
TOP3B-216ENST00000487485 SIRT4Q9Y6E7 314 aaPredicted RBP9.06□□□□□ -0.96
TOP3B-216ENST00000487485 DYSFO75923 2080 aa9.06□□□□□ -0.96
TOP3B-216ENST00000487485 TANC2Q9HCD6 1990 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 ZNF816-ZNF321PA0A0X1KG74 233 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 A6NIN4 97 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 TMEM212A6NML5 194 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 ZNF850A8MQ14 1090 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 F5H5P2 479 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 MRPS14O60783 128 aaKnown RBP9.05□□□□□ -0.96
TOP3B-216ENST00000487485 NCR1O76036 304 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 CST4P01036 141 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 CD55P08174 381 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 RPSAP08865 295 aaKnown RBP9.05□□□□□ -0.96
TOP3B-216ENST00000487485 DAOP14920 347 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 FAHP16930 419 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 ZNF12P17014 697 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 ACHEP22303 614 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 COL8A2P25067 703 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 GNALP38405 381 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 MAP2K4P45985 399 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 TAS2R43P59537 309 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 SLC3A1Q07837 685 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 ACSM1Q08AH1 577 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 DOC2BQ14184 412 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 SPHARQ15513 63 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 OR8G1Q15617 311 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 KRTAP24-1Q3LI83 254 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 CHRFAM7AQ494W8 412 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 SPRNQ5BIV9 151 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 ZBTB37Q5TC79 503 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 KRT74Q7RTS7 529 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 ZFP41Q8N8Y5 198 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 CCDC54Q8NEL0 328 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 OR51A4Q8NGJ6 313 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 OR10AC1Q8NH08 325 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 UBASH3BQ8TF42 649 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 DVL3Q92997 716 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-216ENST00000487485 ADAT1Q9BUB4 502 aaKnown RBP9.05□□□□□ -0.96
TOP3B-216ENST00000487485 PAPOLGQ9BWT3 736 aaKnown RBP9.05□□□□□ -0.96
TOP3B-216ENST00000487485 SAP30LQ9HAJ7 183 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 ENPP5Q9UJA9 477 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 HHLA2Q9UM44 414 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 LRCH1Q9Y2L9 728 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 LSM2Q9Y333 95 aaKnown RBP9.05□□□□□ -0.96
TOP3B-216ENST00000487485 NOP16Q9Y3C1 178 aaKnown RBP9.05□□□□□ -0.96
TOP3B-216ENST00000487485 MPC1Q9Y5U8 109 aa9.05□□□□□ -0.96
TOP3B-216ENST00000487485 PNMA8CA0A1B0GUJ8 204 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 DHRS7CA6NNS2 312 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 LYNX1G3V0Z9 82 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 PLPP2O43688 288 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 LMX1BO60663 402 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 LYNX1P0DP58 116 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 TNFRSF1AP19438 455 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 CELP19835 753 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 CRYBB2P43320 205 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 SRP9P49458 86 aaKnown RBP9.04□□□□□ -0.96
TOP3B-216ENST00000487485 CHN2P52757 468 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 CDH15P55291 814 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 BDH1Q02338 343 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 EMX1Q04741 257 aaPredicted RBP9.04□□□□□ -0.96
TOP3B-216ENST00000487485 PRDX4Q13162 271 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 MAB21L1Q13394 359 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 DMKNQ6E0U4 476 aaPredicted RBP9.04□□□□□ -0.96
TOP3B-216ENST00000487485 MOB3CQ70IA8 216 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 SPARTQ8N0X7 666 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 ZNF525Q8N782 197 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 SPERTQ8NA61 448 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 OR13C3Q8NGS6 347 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 OR8S1Q8NH09 359 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 RPS4Y2Q8TD47 263 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 ITLN1Q8WWA0 313 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 GHSRQ92847 366 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 SMIM19Q96E16 107 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 MEGF10Q96KG7 1140 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 OR2V2Q96R30 315 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 PLEKHA1Q9HB21 404 aa9.04□□□□□ -0.96
TOP3B-216ENST00000487485 IGHV1-69-2A0A0G2JMI3 117 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-216ENST00000487485 IGHV3-64DA0A0J9YX35 117 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 LOC100289279A0A1B0GTE1 492 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 ANXA2P2A6NMY6 339 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 A8MV72 311 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-216ENST00000487485 CDC14BO60729 498 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 NRASP01111 189 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 HSMCR30P0CW71 290 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 CD200P41217 278 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 MRPS11P82912 194 aaKnown RBP9.03□□□□□ -0.96
TOP3B-216ENST00000487485 MZT1Q08AG7 82 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 TBCEQ15813 527 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-216ENST00000487485 CEACAM21Q3KPI0 293 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 KCTD21Q4G0X4 260 aa9.03□□□□□ -0.96
TOP3B-216ENST00000487485 DMRTC1Q5HYR2 192 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms