RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 LOXL4Q96JB6 756 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 PRRX2Q99811 253 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 NCOA6Q14686 2063 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 KIAA1549Q9HCM3 1950 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 A0A0G2JMM0 328 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 A0A1W2PPB8 328 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 A0A1W2PRS3 328 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 FOXI3A8MTJ6 420 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 KIR3DP1A8MWS1 328 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 MGMTP16455 207 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 FAHP16930 419 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 AKR1C4P17516 323 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 VAMP1P23763 118 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 ACP1P24666 158 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 OTX2P32243 289 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 RPS18P62269 152 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 Q0VFX4 171 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 ZNF345Q14585 488 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 DMRTC1Q5HYR2 192 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 DCAF12Q5T6F0 453 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 SIGIRRQ6IA17 410 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 C1QL2Q7Z5L3 287 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 YRDCQ86U90 279 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 OR5D18Q8NGL1 313 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 SUN5Q8TC36 379 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 ZNF837Q96EG3 531 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 SEC22AQ96IW7 307 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 CXorf58Q96LI9 332 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 NARFLQ9H6Q4 476 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 SDHAF2Q9NX18 166 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 NUP50Q9UKX7 468 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 TCFL5Q9UL49 500 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 TNFSF18Q9UNG2 199 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 PIGLQ9Y2B2 252 aa15.76■□□□□ 0.11
PDLIM7-207ENST00000486828 MFSD2BA6NFX1 497 aa15.75■□□□□ 0.11
PDLIM7-207ENST00000486828 STMND1H3BQB6 276 aa15.75■□□□□ 0.11
PDLIM7-207ENST00000486828 MTRF1O75570 445 aaKnown RBP15.75■□□□□ 0.11
PDLIM7-207ENST00000486828 DBHP09172 617 aa15.75■□□□□ 0.11
PDLIM7-207ENST00000486828 KCNRGQ8N5I3 272 aa15.75■□□□□ 0.11
PDLIM7-207ENST00000486828 OR14L1PQ8NHC6 308 aa15.75■□□□□ 0.11
PDLIM7-207ENST00000486828 PPP1R1CQ8WVI7 109 aa15.75■□□□□ 0.11
PDLIM7-207ENST00000486828 PADI1Q9ULC6 663 aa15.75■□□□□ 0.11
PDLIM7-207ENST00000486828 EP300Q09472 2414 aaPredicted RBP15.75■□□□□ 0.11
PDLIM7-207ENST00000486828 CEACAM18A8MTB9 384 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 OR2F2O95006 317 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 SPDEFO95238 335 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 FCGR2AP12318 317 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 UBA52P62987 128 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 OR2F1Q13607 317 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 ARFRP1Q13795 201 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 SLC16A14Q7RTX9 510 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 GGNQ86UU5 652 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 GPR137CQ8N3F9 429 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 OR5M9Q8NGP3 310 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 CASTOR1Q8WTX7 329 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 HAS2Q92819 552 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 ARRDC1-AS1Q9H2J1 176 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 PCDHGA1Q9Y5H4 931 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 OTOGLQ3ZCN5 2332 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 DBX1A6NMT0 343 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 POM121CA8CG34 1229 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 HPP00738 406 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 M6PRP20645 277 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 CRYGSP22914 178 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 MPLP40238 635 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 CARD18P57730 90 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 ARPC4P59998 168 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 RAB35Q15286 201 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 LRRC37A5PQ49AS3 106 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 H3F3CQ6NXT2 135 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 OR52H1Q8NGJ2 320 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 OR5H2Q8NGV7 314 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 ZNF775Q96BV0 537 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 CYYR1Q96J86 154 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 DHRS9Q9BPW9 319 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 TM2D1Q9BX74 207 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 GPR132Q9UNW8 380 aa15.74■□□□□ 0.11
PDLIM7-207ENST00000486828 COL27A1Q8IZC6 1860 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 TCN2P20062 427 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 ATP1B3P54709 279 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 SNAI3Q3KNW1 292 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 TMEM128Q5BJH2 165 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 DRAM2Q6UX65 266 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 KCTD9Q7L273 389 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 ST8SIA2Q92186 375 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 SMOC1Q9H4F8 434 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 PFDN2Q9UHV9 154 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 LOXL2Q9Y4K0 774 aa15.73■□□□□ 0.11
PDLIM7-207ENST00000486828 ZSCAN5BA6NJL1 495 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 LRRC3CA6NJW4 275 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 ZNF716A6NP11 495 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 FAM25EA8MYX2 175 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 SGCEO43556 437 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 SYNGR3O43761 229 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 RLN2P04090 185 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 CST2P09228 141 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 AMY2BP19961 511 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 SERPINA2P20848 420 aa15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 BLVRBP30043 206 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-207ENST00000486828 SMUG1Q53HV7 270 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms