RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PITPNBP48739 271 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 PSMA6P60900 246 aaKnown RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 SEC61A1P61619 476 aaKnown RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 RPS7P62081 194 aaKnown RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 GABPB1Q06547 395 aaPredicted RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 EGR3Q06889 387 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 KLF17Q5JT82 389 aaPredicted RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 PRAMEF6Q5VXH4 476 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 ZFP1Q6P2D0 407 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 LYPD2Q6UXB3 125 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 BTNL3Q6UXE8 466 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 DOK3Q7L591 496 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 AMIGO2Q86SJ2 522 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 GID4Q8IVV7 300 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 TCEANCQ8N8B7 351 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 OR5A2Q8NGI9 324 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 OR5P3Q8WZ94 311 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 LYZL4Q96KX0 146 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 OR8B4Q96RC9 309 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 MICU1Q9BPX6 476 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 RBM4BQ9BQ04 359 aaKnown RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 MRI1Q9BV20 369 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 GABARAPL3Q9BY60 117 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 UFSP2Q9NUQ7 469 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 C1orf123Q9NWV4 160 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 CLN6Q9NWW5 311 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 FAM206AQ9NX38 181 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 CLN8Q9UBY8 286 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 NUFIP1Q9UHK0 495 aaKnown RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 RHBDD3Q9Y3P4 386 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 LRP12Q9Y561 859 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 ZNF816-ZNF321PA0A0X1KG74 233 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 TMEM89A2RUT3 159 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 ANXA2P2A6NMY6 339 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 CLDN34H7C241 214 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 MITFO75030 526 aaPredicted RBP5.82□□□□□ -1.48
VPS50-218ENST00000485994 MTRF1O75570 445 aaKnown RBP5.82□□□□□ -1.48
VPS50-218ENST00000485994 CIB2O75838 187 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 SULT1C4O75897 302 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 ZNF205O95201 554 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 PLATP00750 562 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 GRPP07492 148 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 OR2T7P0C7T2 308 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 ACKR3P25106 362 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 HTR1FP30939 366 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 RBMXP38159 391 aaKnown RBP5.82□□□□□ -1.48
VPS50-218ENST00000485994 GNALP38405 381 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 TGM4P49221 684 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 RIDAP52758 137 aaKnown RBP5.82□□□□□ -1.48
VPS50-218ENST00000485994 HCCSP53701 268 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 MICBQ29980 383 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 ZNF829Q3KNS6 432 aaPredicted RBP5.82□□□□□ -1.48
VPS50-218ENST00000485994 CEACAM21Q3KPI0 293 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 FAM201AQ5SY85 155 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 ZNF684Q5T5D7 378 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 TMEM42Q69YG0 159 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 WDR82Q6UXN9 313 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 C1orf122Q6ZSJ8 110 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 CCDC121Q6ZUS5 278 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 SPATC1Q76KD6 591 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 KCTD20Q7Z5Y7 419 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 ELMOD2Q8IZ81 293 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 PNLDC1Q8NA58 520 aaKnown RBP5.82□□□□□ -1.48
VPS50-218ENST00000485994 LY6G5BQ8NDX9 201 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 CCDC54Q8NEL0 328 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 OR8B12Q8NGG6 310 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 OR2T27Q8NH04 317 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 OR8S1Q8NH09 359 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 HRASLS5Q96KN8 279 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 HIST1H2AAQ96QV6 131 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 CNN2Q99439 309 aaKnown RBP5.82□□□□□ -1.48
VPS50-218ENST00000485994 CIB1Q99828 191 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 NUDT16L1Q9BRJ7 211 aaKnown RBP5.82□□□□□ -1.48
VPS50-218ENST00000485994 RTL8AQ9BWD3 113 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 PBOV1Q9GZY1 135 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 MOB1AQ9H8S9 216 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 ZMAT3Q9HA38 289 aaKnown RBP5.82□□□□□ -1.48
VPS50-218ENST00000485994 BRD7Q9NPI1 651 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 RASL12Q9NYN1 266 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 USE1Q9NZ43 259 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 DNAJC27Q9NZQ0 273 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 COPS3Q9UNS2 423 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 KLHDC2Q9Y2U9 406 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 N6AMT1Q9Y5N5 214 aa5.82□□□□□ -1.48
VPS50-218ENST00000485994 TENM1Q9UKZ4 2725 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 IGHV3-64DA0A0J9YX35 117 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 A0A1B0GTI1 187 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 OR5B21A6NL26 309 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 ZNF670-ZNF695F2Z2N8 137 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 P2RY10O00398 339 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 DLGAP1O14490 977 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 CDIPTO14735 213 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 ADAM20O43506 726 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 ENSAO43768 121 aaKnown RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 NOS1APO75052 506 aaPredicted RBP5.81□□□□□ -1.48
VPS50-218ENST00000485994 DHRS3O75911 302 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 ALPLP05186 524 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 MMP9P14780 707 aa5.81□□□□□ -1.48
VPS50-218ENST00000485994 CCL1P22362 96 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms